RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 THUMPD1Q9NXG2 353 aaKnown RBP13.62□□□□□ -0.23
CDH3-201ENST00000264012 LOC110117498-PIK3R3F6TDL0 507 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 AVPR1BP47901 424 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 PGDP52209 483 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 DIO3P55073 304 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 QPRTQ15274 297 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 ZNF311Q5JNZ3 666 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 DCUN1D3Q8IWE4 304 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 TTC9BQ8N6N2 239 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 TRPV3Q8NET8 790 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 RHEBL1Q8TAI7 183 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 RFKQ969G6 155 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 GRID2O43424 1007 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 ETV3P41162 512 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 ARSDP51689 593 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 MOGSQ13724 837 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 PPP1R3AQ16821 1122 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 SATL1Q86VE3 508 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 KCT2Q8NC54 265 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 FBXO15Q8NCQ5 510 aaPredicted RBP13.62□□□□□ -0.23
CDH3-201ENST00000264012 OR10G2Q8NGC3 310 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 OR9A1PQ8NGU1 263 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 PGAP3Q96FM1 320 aaPredicted RBP13.62□□□□□ -0.23
CDH3-201ENST00000264012 LRRC42Q9Y546 428 aa13.62□□□□□ -0.23
CDH3-201ENST00000264012 HCN1O60741 890 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 RAB15P59190 212 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 RPS13P62277 151 aaKnown RBP13.61□□□□□ -0.23
CDH3-201ENST00000264012 DSC3Q14574 896 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 PDCD4Q53EL6 469 aaKnown RBP13.61□□□□□ -0.23
CDH3-201ENST00000264012 C6orf136Q5SQH8 315 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 CCDC80Q76M96 950 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 ZDHHC14Q8IZN3 488 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 FAM46DQ8NEK8 389 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 NSUN5Q96P11 429 aaKnown RBP13.61□□□□□ -0.23
CDH3-201ENST00000264012 COPS4Q9BT78 406 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 ELL3Q9HB65 397 aaPredicted RBP13.61□□□□□ -0.23
CDH3-201ENST00000264012 TVP23BQ9NYZ1 205 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 ALOX5P09917 674 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 CLLU1OSQ5K130 101 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 MARCH8Q5T0T0 291 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 FAM180AQ6UWF9 173 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 SUSD1Q6UWL2 747 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 TRPV1Q8NER1 839 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 TMBIM1Q969X1 311 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 PKP2Q99959 881 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 FAM120CQ9NX05 1096 aaKnown RBP13.61□□□□□ -0.23
CDH3-201ENST00000264012 SDHDO14521 159 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 AIREO43918 545 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 TNFRSF21O75509 655 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 BCAS2O75934 225 aaPredicted RBP13.61□□□□□ -0.23
CDH3-201ENST00000264012 GLDCP23378 1020 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 SUZ12Q15022 739 aaKnown RBP13.61□□□□□ -0.23
CDH3-201ENST00000264012 EIPR1Q53HC9 387 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 RPTNQ6XPR3 784 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 FAM43BQ6ZT52 329 aaPredicted RBP13.61□□□□□ -0.23
CDH3-201ENST00000264012 PACRGLQ8N7B6 248 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 TPT1P8Q9HAU6 139 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 SLCO3A1Q9UIG8 710 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 OAS3Q9Y6K5 1087 aaKnown RBP13.61□□□□□ -0.23
CDH3-201ENST00000264012 PRRC2BQ5JSZ5 2229 aaKnown RBP13.61□□□□□ -0.23
CDH3-201ENST00000264012 B4DGG1 531 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 UBXN7O94888 489 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 STATHP02808 62 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 TAS2R50P59544 299 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 RHAGQ02094 409 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 ABHD18Q0P651 414 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 PPP1R8Q12972 351 aaKnown RBP13.61□□□□□ -0.23
CDH3-201ENST00000264012 ITPRIPL2Q3MIP1 535 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 PSAPL1Q6NUJ1 521 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 DENND1AQ8TEH3 1009 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 LRCH3Q96II8 777 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 COX4I2Q96KJ9 171 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 P2RX2Q9UBL9 471 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 SNX7Q9UNH6 387 aa13.61□□□□□ -0.23
CDH3-201ENST00000264012 SLC30A4O14863 429 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 GSRP00390 522 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 GBAP04062 536 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 DNAJA1P31689 397 aaKnown RBP13.6□□□□□ -0.23
CDH3-201ENST00000264012 OR2T5Q6IEZ7 315 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 SMARCD3Q6STE5 483 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 FAM131AQ6UXB0 335 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 LAPTM4BQ86VI4 370 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 LGI4Q8N135 537 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 OR2T29Q8NH02 315 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 COPS7AQ9UBW8 275 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 PRSS51A0A1B0GVH4 220 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 H0YC42 278 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 K7ERQ8 282 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 JUNP05412 331 aaKnown RBP13.6□□□□□ -0.23
CDH3-201ENST00000264012 OMPP47874 163 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 AMZ1Q400G9 498 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 ABHD13Q7L211 337 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 C12orf76Q8N812 135 aaPredicted RBP13.6□□□□□ -0.23
CDH3-201ENST00000264012 CAMKVQ8NCB2 501 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 SNX33Q8WV41 574 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 AMBNQ9NP70 447 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 SESN1Q9Y6P5 492 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 TMEM150CB9EJG8 249 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 LATS1O95835 1130 aa13.6□□□□□ -0.23
CDH3-201ENST00000264012 HNRNPA1P09651 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms