RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 TMEM202A6NGA9 273 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 PCDHGA12O60330 932 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 CKMP06732 381 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 EBLN1P0CF75 366 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 GTF2E2P29084 291 aaKnown RBP8.86□□□□□ -0.99
MSH4-201ENST00000263187 VEGFBP49765 207 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 RPP38P78345 283 aaKnown RBP8.86□□□□□ -0.99
MSH4-201ENST00000263187 B4GALNT1Q00973 533 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 HKDC1Q2TB90 917 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 CCSMST1Q4G0I0 132 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 CCSAPQ6IQ19 270 aaPredicted RBP8.86□□□□□ -0.99
MSH4-201ENST00000263187 RNF180Q86T96 592 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 NXPE1Q8N323 547 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 C2orf73Q8N5S3 287 aaPredicted RBP8.86□□□□□ -0.99
MSH4-201ENST00000263187 ST13P5Q8NFI4 369 aaPredicted RBP8.86□□□□□ -0.99
MSH4-201ENST00000263187 PJA1Q8NG27 643 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 OR4K1Q8NGD4 311 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 CAPNS2Q96L46 248 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 ZNF641Q96N77 438 aaPredicted RBP8.86□□□□□ -0.99
MSH4-201ENST00000263187 MTG2Q9H4K7 406 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 HMG20AQ9NP66 347 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 DYTNA2CJ06 578 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 TBX1O43435 398 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 FZD6O60353 706 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 HPRP00739 348 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 HIST1H2AGP0C0S8 130 aaPredicted RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 HIST1H2ADP20671 130 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 MAD2L1Q13257 205 aaPredicted RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 TUBA3CQ13748 450 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 CBX2Q14781 532 aaPredicted RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 ZNF846Q147U1 533 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.85□□□□□ -0.99
MSH4-201ENST00000263187 NIPAL1Q6NVV3 410 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 NOXRED1Q6NXP6 359 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 CRTC1Q6UUV9 634 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 HIPK1Q86Z02 1210 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 CMTM8Q8IZV2 173 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 Q8N9G6 341 aaPredicted RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 OR5AK3PQ8NH89 298 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 HIST1H2AHQ96KK5 128 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 DACH2Q96NX9 599 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 HIST1H2AJQ99878 128 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 H2AFJQ9BTM1 129 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 ASPSCR1Q9BZE9 553 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 RERGLQ9H628 205 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 RMND5AQ9H871 391 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 RLIMQ9NVW2 624 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 WDR70Q9NW82 654 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 THUMPD1Q9NXG2 353 aaKnown RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 SCN3BQ9NY72 215 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 RHCGQ9UBD6 479 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 TMEM189-UBE2V1I3L0A0 370 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 KPNA4O00629 521 aaPredicted RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 NRG2O14511 850 aaPredicted RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 JRKO75564 520 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 FABP3P05413 133 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 PTPN6P29350 595 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 HOXA9P31269 272 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 PREPP48147 710 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 ST13P50502 369 aaKnown RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 NOGQ13253 232 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 XKR6Q5GH73 641 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 CERS6Q6ZMG9 384 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 NCCRP1Q6ZVX7 275 aaPredicted RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 TRIM46Q7Z4K8 759 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 DNAJB7Q7Z6W7 309 aaPredicted RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 SYTL1Q8IYJ3 562 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 ZNF366Q8N895 744 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 PCSK9Q8NBP7 692 aaKnown RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 DNASE1L2Q92874 299 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 LGALS12Q96DT0 336 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 ZHX1-C8orf76Q96EF9 292 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 COPS8Q99627 209 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 CLSTN3Q9BQT9 956 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 VN1R3Q9BXE9 311 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 KCNH6Q9H252 994 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 SLC32A1Q9H598 525 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 KIAA1522Q9P206 1035 aaPredicted RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 ACSL6Q9UKU0 697 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 H7C0S8 307 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 RGS10O43665 173 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 PQBP1O60828 265 aaKnown RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 LHCGRP22888 699 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 RRM2P31350 389 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 SPAM1P38567 509 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 LIPAP38571 399 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 GZMMP51124 257 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 CLDN8P56748 225 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 RPS3AP61247 264 aaKnown RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 IRF8Q02556 426 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 ANKRD13BQ86YJ7 626 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 BBS7Q8IWZ6 715 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 SLC7A5P1Q8MH63 180 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 GLB1L3Q8NCI6 653 aaPredicted RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 PDLIM5Q96HC4 596 aaKnown RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 ABHD8Q96I13 439 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 KLF16Q9BXK1 252 aaPredicted RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 TRIT1Q9H3H1 467 aaKnown RBP8.85□□□□□ -0.99
MSH4-201ENST00000263187 SNX8Q9Y5X2 465 aa8.85□□□□□ -0.99
MSH4-201ENST00000263187 DOCK6Q96HP0 2047 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms