RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ELNP15502 786 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 SLC6A4P31645 630 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 EEFSECP57772 596 aaKnown RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 SLC13A2Q13183 592 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 ZNF648Q5T619 568 aaPredicted RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 GOLGA7Q7Z5G4 137 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 OR8K3Q8NH51 312 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 AURKBQ96GD4 344 aaPredicted RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 TFB2MQ9H5Q4 396 aaKnown RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 EIF2B3Q9NR50 452 aaKnown RBP11.77□□□□□ -0.53
SMG6-201ENST00000263073 PARPBPQ9NWS1 579 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 UPB1Q9UBR1 384 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 KAT6AQ92794 2004 aa11.77□□□□□ -0.53
SMG6-201ENST00000263073 C12orf71A8MTZ7 269 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 SLC9A3R1O14745 358 aaPredicted RBP11.76□□□□□ -0.53
SMG6-201ENST00000263073 S100A2P29034 98 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 PTGER3P43115 390 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 C1QTNF8P60827 252 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 ZNF829Q3KNS6 432 aaPredicted RBP11.76□□□□□ -0.53
SMG6-201ENST00000263073 SPANXN4Q5MJ08 99 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 SLC35F1Q5T1Q4 408 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 PLCZ1Q86YW0 608 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 SLC22A15Q8IZD6 547 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 PYURFQ96I23 114 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 DHRS1Q96LJ7 313 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 CCDC106Q9BWC9 280 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 NUSAP1Q9BXS6 441 aaKnown RBP11.76□□□□□ -0.53
SMG6-201ENST00000263073 CERS4Q9HA82 394 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 ERVK13-1Q9NX77 482 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 TBC1D14Q9P2M4 693 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 ERVK-18Q9QC07 812 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 DPP7Q9UHL4 492 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 SLC7A4O43246 635 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 CHP2O43745 196 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 CREG1O75629 220 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 GLDCP23378 1020 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 ACVRL1P37023 503 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 CSKP41240 450 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 ZNF81P51508 661 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 SLBPQ14493 270 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMG6-201ENST00000263073 SEMA3AQ14563 771 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 SPRED3Q2MJR0 410 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 ZC3HC1Q86WB0 502 aaKnown RBP11.76□□□□□ -0.53
SMG6-201ENST00000263073 FAM217AQ8IXS0 508 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 GPC2Q8N158 579 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 MINDY2Q8NBR6 621 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 INO80EQ8NBZ0 244 aaPredicted RBP11.76□□□□□ -0.53
SMG6-201ENST00000263073 TM9SF2Q99805 663 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 CLCA3PQ9Y6N3 262 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 EIF1AYO14602 144 aaKnown RBP11.76□□□□□ -0.53
SMG6-201ENST00000263073 BCAS2O75934 225 aaPredicted RBP11.76□□□□□ -0.53
SMG6-201ENST00000263073 GSTT2BP0CG30 244 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 VAMP1P23763 118 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 SNRPD2P62316 118 aaKnown RBP11.76□□□□□ -0.53
SMG6-201ENST00000263073 PRR5P85299 388 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 SLC25A11Q02978 314 aaKnown RBP11.76□□□□□ -0.53
SMG6-201ENST00000263073 KIAA0930Q6ICG6 404 aaPredicted RBP11.76□□□□□ -0.53
SMG6-201ENST00000263073 MND1Q9BWT6 205 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 MRPL15Q9P015 296 aaKnown RBP11.76□□□□□ -0.53
SMG6-201ENST00000263073 RUVBL1Q9Y265 456 aaKnown RBP11.76□□□□□ -0.53
SMG6-201ENST00000263073 PCDHGB3Q9Y5G1 929 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 ZNF8P17098 575 aaPredicted RBP11.76□□□□□ -0.53
SMG6-201ENST00000263073 STOMP27105 288 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 NR4A2P43354 598 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 C1orf189Q5VU69 101 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 ZNF676Q8N7Q3 588 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 GALNT11Q8NCW6 608 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 CLEC4DQ8WXI8 215 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 EFHD2Q96C19 240 aaPredicted RBP11.76□□□□□ -0.53
SMG6-201ENST00000263073 IL1RAPQ9NPH3 570 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 ABCB8Q9NUT2 735 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 A0A1W2PRQ8 180 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 ABCB7O75027 752 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 ESR1P03372 595 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 RB1P06400 928 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 DSTNP60981 165 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 MAB21L1Q13394 359 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 CERS6Q6ZMG9 384 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 PEX5LQ8IYB4 626 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 CLDN19Q8N6F1 224 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 POP5Q969H6 163 aaKnown RBP11.76□□□□□ -0.53
SMG6-201ENST00000263073 PEBP4Q96S96 227 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMG6-201ENST00000263073 DPAGT1Q9H3H5 408 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 GKN1Q9NS71 199 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 ALG5Q9Y673 324 aa11.76□□□□□ -0.53
SMG6-201ENST00000263073 ACADVLP49748 655 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 DIO3P55073 304 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 MAP2K5Q13163 448 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 ADAM15Q13444 863 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 ZNF773Q6PK81 442 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 GATAD2BQ8WXI9 593 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 NSUN5Q96P11 429 aaKnown RBP11.75□□□□□ -0.53
SMG6-201ENST00000263073 FKBP14Q9NWM8 211 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 FLRT1Q9NZU1 646 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 TNFRSF10DQ9UBN6 386 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 GNG8Q9UK08 70 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 HAS3O00219 553 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 SLC31A1O15431 190 aa11.75□□□□□ -0.53
SMG6-201ENST00000263073 C8BP07358 591 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms