RNA–Protein interactions for RNA: ENST00000262435.13

SMURF2-201, Transcript of SMAD specific E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF2, Length 2,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF2-201ENST00000262435 ZBTB20Q9HC78 741 aaPredicted RBP15.29■□□□□ 0.04
SMURF2-201ENST00000262435 ZNF334Q9HCZ1 680 aaPredicted RBP15.29■□□□□ 0.04
SMURF2-201ENST00000262435 PAIP2BQ9ULR5 123 aaKnown RBP15.29■□□□□ 0.04
SMURF2-201ENST00000262435 CHD7Q9P2D1 2997 aa15.29■□□□□ 0.04
SMURF2-201ENST00000262435 SAP18O00422 153 aaKnown RBP15.29■□□□□ 0.04
SMURF2-201ENST00000262435 ERN1O75460 977 aaKnown RBP15.29■□□□□ 0.04
SMURF2-201ENST00000262435 HIST1H2AGP0C0S8 130 aaPredicted RBP15.29■□□□□ 0.04
SMURF2-201ENST00000262435 HIST1H2ADP20671 130 aa15.29■□□□□ 0.04
SMURF2-201ENST00000262435 ARHGDIAP52565 204 aa15.29■□□□□ 0.04
SMURF2-201ENST00000262435 ATN1P54259 1190 aaPredicted RBP15.29■□□□□ 0.04
SMURF2-201ENST00000262435 PRSS36Q5K4E3 855 aa15.29■□□□□ 0.04
SMURF2-201ENST00000262435 CALHM3Q86XJ0 350 aa15.29■□□□□ 0.04
SMURF2-201ENST00000262435 BBS7Q8IWZ6 715 aa15.29■□□□□ 0.04
SMURF2-201ENST00000262435 CMTM8Q8IZV2 173 aa15.29■□□□□ 0.04
SMURF2-201ENST00000262435 HIST1H2AHQ96KK5 128 aa15.29■□□□□ 0.04
SMURF2-201ENST00000262435 ZNF641Q96N77 438 aaPredicted RBP15.29■□□□□ 0.04
SMURF2-201ENST00000262435 HIST1H2AJQ99878 128 aa15.29■□□□□ 0.04
SMURF2-201ENST00000262435 H2AFJQ9BTM1 129 aa15.29■□□□□ 0.04
SMURF2-201ENST00000262435 ROGDIQ9GZN7 287 aa15.29■□□□□ 0.04
SMURF2-201ENST00000262435 RMND5AQ9H871 391 aa15.29■□□□□ 0.04
SMURF2-201ENST00000262435 USE1Q9NZ43 259 aa15.29■□□□□ 0.04
SMURF2-201ENST00000262435 SLCO3A1Q9UIG8 710 aa15.29■□□□□ 0.04
SMURF2-201ENST00000262435 YIPF1Q9Y548 306 aa15.29■□□□□ 0.04
SMURF2-201ENST00000262435 PLXNA4Q9HCM2 1894 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 LOC100506127A0A0U1RQW1 187 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 PCDHGA12O60330 932 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 HOXA9P31269 272 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 IDH2P48735 452 aaKnown RBP15.28■□□□□ 0.04
SMURF2-201ENST00000262435 TMEM150AQ86TG1 271 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 ANKRD13BQ86YJ7 626 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 ADAMTS19Q8TE59 1207 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 ALG14Q96F25 216 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 TRIT1Q9H3H1 467 aaKnown RBP15.28■□□□□ 0.04
SMURF2-201ENST00000262435 KIAA1522Q9P206 1035 aaPredicted RBP15.28■□□□□ 0.04
SMURF2-201ENST00000262435 TRIM43BA6NCK2 446 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 FAM220BPB1ANY3 271 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 KCNK5O95279 499 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 CD36P16671 472 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 ITIH1P19827 911 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 CD9P21926 228 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 RPP38P78345 283 aaKnown RBP15.28■□□□□ 0.04
SMURF2-201ENST00000262435 LMAN2Q12907 356 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 INO80DQ53TQ3 878 aaPredicted RBP15.28■□□□□ 0.04
SMURF2-201ENST00000262435 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.28■□□□□ 0.04
SMURF2-201ENST00000262435 RNF168Q8IYW5 571 aaPredicted RBP15.28■□□□□ 0.04
SMURF2-201ENST00000262435 CADM3Q8N126 398 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 HMG20AQ9NP66 347 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 TRPS1Q9UHF7 1281 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 MYOFQ9NZM1 2061 aa15.28■□□□□ 0.04
SMURF2-201ENST00000262435 RANBP2P49792 3224 aaKnown RBP15.28■□□□□ 0.04
SMURF2-201ENST00000262435 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.27■□□□□ 0.04
SMURF2-201ENST00000262435 GRXCR2A6NFK2 248 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 PQBP1O60828 265 aaKnown RBP15.27■□□□□ 0.04
SMURF2-201ENST00000262435 FABP3P05413 133 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 HSMCR30P0CW71 290 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 DBTP11182 482 aaKnown RBP15.27■□□□□ 0.04
SMURF2-201ENST00000262435 PSMA3P25788 255 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 KDELR2P33947 212 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 PTSQ03393 145 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 ILF2Q12905 390 aaKnown RBP15.27■□□□□ 0.04
SMURF2-201ENST00000262435 TP53BP2Q13625 1128 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 UGT8Q16880 541 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 HKDC1Q2TB90 917 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 TTLL9Q3SXZ7 439 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 XKR6Q5GH73 641 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 IER5LQ5T953 404 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 SHQ1Q6PI26 577 aaKnown RBP15.27■□□□□ 0.04
SMURF2-201ENST00000262435 SPPL2AQ8TCT8 520 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 C6orf62Q9GZU0 229 aaPredicted RBP15.27■□□□□ 0.04
SMURF2-201ENST00000262435 MTG2Q9H4K7 406 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 IL1RAPQ9NPH3 570 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 THUMPD1Q9NXG2 353 aaKnown RBP15.27■□□□□ 0.04
SMURF2-201ENST00000262435 SCN3BQ9NY72 215 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 SH3BP4Q9P0V3 963 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 SLC6A14Q9UN76 642 aa15.27■□□□□ 0.04
SMURF2-201ENST00000262435 PABPN1LA6NDY0 278 aaKnown RBP15.27■□□□□ 0.03
SMURF2-201ENST00000262435 ZNF821O75541 412 aaPredicted RBP15.27■□□□□ 0.03
SMURF2-201ENST00000262435 CD22P20273 847 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 AOAHP28039 575 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 PBLDP30039 288 aaPredicted RBP15.27■□□□□ 0.03
SMURF2-201ENST00000262435 CRISP3P54108 245 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 SLC35A2P78381 396 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 IRF8Q02556 426 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 ABHD18Q0P651 414 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 ZNF846Q147U1 533 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 CDKN3Q16667 212 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 INAVAQ3KP66 663 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.27■□□□□ 0.03
SMURF2-201ENST00000262435 RETSATQ6NUM9 610 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 NIPAL1Q6NVV3 410 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 LSRQ86X29 649 aaPredicted RBP15.27■□□□□ 0.03
SMURF2-201ENST00000262435 PLD3Q8IV08 490 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 OR4K1Q8NGD4 311 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 CDK5RAP1Q96SZ6 601 aaKnown RBP15.27■□□□□ 0.03
SMURF2-201ENST00000262435 C2orf49Q9BVC5 232 aaPredicted RBP15.27■□□□□ 0.03
SMURF2-201ENST00000262435 CWH43Q9H720 699 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 TAS2R16Q9NYV7 291 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 ZNF229Q9UJW7 825 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 SNX6Q9UNH7 406 aa15.27■□□□□ 0.03
SMURF2-201ENST00000262435 SLC16A6O15403 523 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms