RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 PRMT9Q6P2P2 845 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 Q6ZNX1 250 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 ZBTB46Q86UZ6 589 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 TCAIMQ8N3R3 496 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 GPR156Q8NFN8 814 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 HCAR2Q8TDS4 363 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 SLC13A3Q8WWT9 602 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 EME1Q96AY2 570 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 MRPL38Q96DV4 380 aaKnown RBP13.15□□□□□ -0.3
VMP1-201ENST00000262291 OR52E6Q96RD3 313 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 SEPHS2Q99611 448 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 CGREF1Q99674 301 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 INPP5KQ9BT40 448 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 ACAT2Q9BWD1 397 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 SLC29A3Q9BZD2 475 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 COQ10BQ9H8M1 238 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 DZANK1Q9NVP4 752 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 CEPT1Q9Y6K0 416 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 MUC22E2RYF6 1773 aaPredicted RBP13.15□□□□□ -0.3
VMP1-201ENST00000262291 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.15□□□□□ -0.3
VMP1-201ENST00000262291 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.15□□□□□ -0.3
VMP1-201ENST00000262291 SAP18O00422 153 aaKnown RBP13.15□□□□□ -0.3
VMP1-201ENST00000262291 SLC16A5O15375 505 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 C1orf105O95561 183 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 ETHE1O95571 254 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 PAK4O96013 591 aaPredicted RBP13.15□□□□□ -0.3
VMP1-201ENST00000262291 LAMP2P13473 410 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 JAK1P23458 1154 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 MAT2AP31153 395 aaKnown RBP13.15□□□□□ -0.3
VMP1-201ENST00000262291 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
VMP1-201ENST00000262291 CD300CQ08708 224 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 CYP51A1Q16850 503 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 TBCELQ5QJ74 424 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 ATAT1Q5SQI0 421 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 TMPRSS11BQ86T26 416 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 NLRP8Q86W28 1048 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 HDDC3Q8N4P3 179 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 ZNF480Q8WV37 535 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 GLMNQ92990 594 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 NEIL2Q969S2 332 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 FOPNLQ96NB1 174 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 DCUN1D5Q9BTE7 237 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 THUMPD3Q9BV44 507 aaKnown RBP13.15□□□□□ -0.3
VMP1-201ENST00000262291 CLEC1BQ9P126 229 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 NFKBIL1Q9UBC1 381 aaPredicted RBP13.15□□□□□ -0.3
VMP1-201ENST00000262291 PPT2Q9UMR5 302 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 NEUROG3Q9Y4Z2 214 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 AP4B1Q9Y6B7 739 aa13.15□□□□□ -0.3
VMP1-201ENST00000262291 H0Y858 1186 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 PSMD11O00231 422 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 ADAM23O75077 832 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 GBAP04062 536 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 APODP05090 189 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 PGRP06401 933 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 SDC1P18827 310 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 RPS14P62263 151 aaKnown RBP13.14□□□□□ -0.31
VMP1-201ENST00000262291 GRIK2Q13002 908 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 GTF2H3Q13889 308 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 MAPKAPK3Q16644 382 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 WSCD2Q2TBF2 565 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 SLC29A1Q99808 456 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 MRPS26Q9BYN8 205 aaKnown RBP13.14□□□□□ -0.31
VMP1-201ENST00000262291 TRPV4Q9HBA0 871 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 SGK2Q9HBY8 427 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 TRIM39Q9HCM9 518 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 DHRS12A0PJE2 317 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 TMX2-CTNND1H3BSU7 103 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 NDUFB5O43674 189 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 AP1G1O43747 822 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 PAPLNO95428 1278 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 HSD17B1P14061 328 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 SLC7A1P30825 629 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 CST6Q15828 149 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 CCDC80Q76M96 950 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 HID1Q8IV36 788 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 C10orf111Q8N326 155 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 L3MBTL4Q8NA19 623 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 OR5AR1Q8NGP9 310 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 OR10A6Q8NH74 314 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 GTF2H4Q92759 462 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 CCDC138Q96M89 665 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 TRMT61BQ9BVS5 477 aaKnown RBP13.14□□□□□ -0.31
VMP1-201ENST00000262291 FZD3Q9NPG1 666 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 SLC25A37Q9NYZ2 338 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 GPRC5BQ9NZH0 403 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 TSC22D4Q9Y3Q8 395 aa13.14□□□□□ -0.31
VMP1-201ENST00000262291 SH3PXD2BA1X283 911 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 MAGEB17A8MXT2 336 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 JUPP14923 745 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 HRH2P25021 359 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 CDKN2CP42773 168 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 TBPL1P62380 186 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 INPP5AQ14642 412 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 ITPRIPL2Q3MIP1 535 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 COQ5Q5HYK3 327 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 C6orf183Q5T699 404 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 AGBL4Q5VU57 503 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 NEK10Q6ZWH5 1172 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 DSG4Q86SJ6 1040 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 MSRB3Q8IXL7 192 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms