RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 CD36P16671 472 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 ENGP17813 658 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 IRS1P35568 1242 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 SERPINB10P48595 397 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 DGKEP52429 567 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 NUDT6P53370 316 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 VLDLRP98155 873 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 CXorf57Q6NSI4 855 aaKnown RBP14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 CERS6Q6ZMG9 384 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 UBE2R2Q712K3 238 aaPredicted RBP14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 SLC22A16Q86VW1 577 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 ANKRD13BQ86YJ7 626 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 HS6ST3Q8IZP7 471 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 ZHX1-C8orf76Q96EF9 292 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 CCDC115Q96NT0 180 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 HEPHQ9BQS7 1158 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 TSC22D4Q9Y3Q8 395 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 OARD1Q9Y530 152 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 FRMPD3Q5JV73 1810 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 DOCK6Q96HP0 2047 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 CLIC1O00299 241 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 HSMCR30P0CW71 290 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 PCMT1P22061 227 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 HNF1BP35680 557 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 IDH2P48735 452 aaKnown RBP14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 CLK3P49761 638 aaKnown RBP14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 CBX2Q14781 532 aaPredicted RBP14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 USP39Q53GS9 565 aaKnown RBP14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 SYT12Q8IV01 421 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 CLECL1Q8IZS7 167 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 APCDD1Q8J025 514 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 CADM3Q8N126 398 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 SETD9Q8NE22 299 aa14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 REXO4Q9GZR2 422 aaKnown RBP14.06□□□□□ -0.16
SFSWAP-201ENST00000261674 NLRC5Q86WI3 1866 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 SOBPA7XYQ1 873 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 RGS10O43665 173 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 ERN1O75460 977 aaKnown RBP14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 HIST1H2AGP0C0S8 130 aaPredicted RBP14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 BPIP17213 487 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 ITIH1P19827 911 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 TNFRSF1BP20333 461 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 HIST1H2ADP20671 130 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 PAX3P23760 479 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 KIR3DL1P43629 444 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 MASP1P48740 699 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 CYP27C1Q4G0S4 372 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 PJA1Q8NG27 643 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 MAL2Q969L2 176 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 HIST1H2AHQ96KK5 128 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 KCNC2Q96PR1 638 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 HIST1H2AJQ99878 128 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 H2AFJQ9BTM1 129 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 SMG9Q9H0W8 520 aaKnown RBP14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 USE1Q9NZ43 259 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 SPG21Q9NZD8 308 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 PPT2Q9UMR5 302 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 TNRC18O15417 2968 aaPredicted RBP14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 FPGTO14772 594 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 TEX28O15482 410 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 RFPL2O75678 378 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 URODP06132 367 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 MAGEA8P43361 318 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 PTCHD3Q3KNS1 767 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 ZNF551Q7Z340 670 aaPredicted RBP14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 MCFD2Q8NI22 146 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 SPPL2AQ8TCT8 520 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 LGALS12Q96DT0 336 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 SLC22A12Q96S37 553 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 TCF25Q9BQ70 676 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 WDR12Q9GZL7 423 aaKnown RBP14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 LHX3Q9UBR4 397 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 ANKRD36A6QL64 1941 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 A0A096LPI6 279 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 TBX1O43435 398 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 OPN1SWP03999 348 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 UGT2B4P06133 528 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 RETP07949 1114 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 CCDC159P0C7I6 412 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 EBLN1P0CF75 366 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 C21orf33P30042 268 aaPredicted RBP14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 MRPL19P49406 292 aaKnown RBP14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 TTLL9Q3SXZ7 439 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 CATSPEREQ5SY80 951 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 ATG9BQ674R7 924 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 SNX20Q7Z614 316 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 APOL4Q9BPW4 351 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 CPPED1Q9BRF8 314 aaPredicted RBP14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 TRIT1Q9H3H1 467 aaKnown RBP14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 IGFLR1Q9H665 355 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 REEP1Q9H902 201 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 PALMDQ9NP74 551 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 TRANK1O15050 2925 aa14.05□□□□□ -0.16
SFSWAP-201ENST00000261674 GRXCR2A6NFK2 248 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 TRIM64BA6NI03 449 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 COX7A2P14406 83 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 SDC1P18827 310 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 TPTEP56180 551 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 GSTM4Q03013 218 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 RFX4Q33E94 735 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms