RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 THEGQ9P2T0 379 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 IL36AQ9UHA7 158 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 OARD1Q9Y530 152 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 TEP1Q99973 2627 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 TEX51A0A1B0GUA7 166 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 H7C4K7 107 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 SCELO95171 688 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 PAMP19021 973 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 HLA-DPA1P20036 260 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 FDFT1P37268 417 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 PIGAP37287 484 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 CSNK1G2P78368 415 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 STAT4Q14765 748 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 TCEA2Q15560 299 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 FAM111BQ6SJ93 734 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 SDCCAG8Q86SQ7 713 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 METTL3Q86U44 580 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 KCT2Q8NC54 265 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 HJURPQ8NCD3 748 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 DDI1Q8WTU0 396 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 ASB12Q8WXK4 309 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 CCDC124Q96CT7 223 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 LRRC37BQ96QE4 947 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 CPNE1Q99829 537 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 PRR14Q9BWN1 585 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 TEX12Q9BXU0 123 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 RDH14Q9HBH5 336 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 CYP4F12Q9HCS2 524 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 APMAPQ9HDC9 416 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 SH2D2AQ9NP31 389 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 OLA1Q9NTK5 396 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 ANGPTL3Q9Y5C1 460 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 ARFGEF3Q5TH69 2177 aa5.39□□□□□ -1.55
TOPBP1-201ENST00000260810 F5H5T6 163 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 NPIPB9F8W1W9 429 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TNFRSF21O75509 655 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 JRKO75564 520 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 SRPRAP08240 638 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 XPAP23025 273 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 HOXA6P31267 233 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TFDP2Q14188 446 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 MED25Q71SY5 747 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TIPARPQ7Z3E1 657 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 SLC15A3Q8IY34 581 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 OR2L2Q8NH16 312 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 PYROXD1Q8WU10 500 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 WASH6PQ9NQA3 447 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TPRP12270 2363 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TGP01266 2768 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 ZGRF1Q86YA3 2104 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TRIM64CA6NLI5 447 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 MAGEB17A8MXT2 336 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 RTCAO00442 366 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 NTN3O00634 580 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TPD52P55327 224 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 SLC25A3Q00325 362 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 RUNX2Q13950 521 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 SPDYAQ5MJ70 313 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 MFSD12Q6NUT3 480 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 PCGF5Q86SE9 256 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 PAQR7Q86WK9 346 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 APH1BQ8WW43 257 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 ANKRD9Q96BM1 317 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 HIC2Q96JB3 615 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TUBGCP5Q96RT8 1024 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TPSD1Q9BZJ3 242 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TRIM15Q9C019 465 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 SLC6A16Q9GZN6 736 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 SEPT10Q9P0V9 454 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 DGKBQ9Y6T7 804 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 FLNBO75369 2602 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 BAHCC1Q9P281 2608 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 NBEAL2Q6ZNJ1 2754 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 A0A087WUV0 522 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TRAV19A0A0A6YYK7 116 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 FEZF1A0PJY2 475 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 PCDH7O60245 1069 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TPST1O60507 370 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 CD59P13987 128 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 CCNG1P51959 295 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 LIM2P55344 173 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 GNGT1P63211 74 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 PHEXP78562 749 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 ZXDAP98168 799 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 CAV1Q03135 178 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 INSCQ1MX18 579 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 PTCHD3Q3KNS1 767 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 LRIF1Q5T3J3 769 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 BLOC1S3Q6QNY0 202 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 CCDC121Q6ZUS5 278 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TRIM69Q86WT6 500 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 HPS6Q86YV9 775 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 RBM45Q8IUH3 476 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 TTC13Q8NBP0 860 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 MTFMTQ96DP5 389 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 DUS3LQ96G46 650 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 AMBRA1Q9C0C7 1298 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 LRMDAQ9H2I8 198 aa5.38□□□□□ -1.55
TOPBP1-201ENST00000260810 CLMPQ9H6B4 373 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms