RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 LMNTD1Q8N9Z9 388 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 PHC3Q8NDX5 983 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 OR1E3Q8WZA6 343 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 TFGQ92734 400 aaPredicted RBP16.88■□□□□ 0.29
SRSF1-201ENST00000258962 MED8Q96G25 268 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 PDXPQ96GD0 296 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 PFDN4Q9NQP4 134 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 FARSBQ9NSD9 589 aaKnown RBP16.88■□□□□ 0.29
SRSF1-201ENST00000258962 MOSPD1Q9UJG1 213 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 ACSL5Q9ULC5 683 aa16.88■□□□□ 0.29
SRSF1-201ENST00000258962 SCAMP1O15126 338 aa16.87■□□□□ 0.29
SRSF1-201ENST00000258962 GYG2O15488 501 aa16.87■□□□□ 0.29
SRSF1-201ENST00000258962 SLC35G4P0C7Q5 338 aa16.87■□□□□ 0.29
SRSF1-201ENST00000258962 NME1P15531 152 aaKnown RBP16.87■□□□□ 0.29
SRSF1-201ENST00000258962 JUNDP17535 347 aa16.87■□□□□ 0.29
SRSF1-201ENST00000258962 KELP23276 732 aa16.87■□□□□ 0.29
SRSF1-201ENST00000258962 RPL10P27635 214 aaKnown RBP16.87■□□□□ 0.29
SRSF1-201ENST00000258962 CLCNKAP51800 687 aa16.87■□□□□ 0.29
SRSF1-201ENST00000258962 TBPL1P62380 186 aa16.87■□□□□ 0.29
SRSF1-201ENST00000258962 MYLK4Q86YV6 388 aaPredicted RBP16.87■□□□□ 0.29
SRSF1-201ENST00000258962 DCUN1D3Q8IWE4 304 aa16.87■□□□□ 0.29
SRSF1-201ENST00000258962 EID2Q8N6I1 236 aa16.87■□□□□ 0.29
SRSF1-201ENST00000258962 USP7Q93009 1102 aa16.87■□□□□ 0.29
SRSF1-201ENST00000258962 RIC8BQ9NVN3 520 aa16.87■□□□□ 0.29
SRSF1-201ENST00000258962 BTBD3Q9Y2F9 522 aa16.87■□□□□ 0.29
SRSF1-201ENST00000258962 GPSM3Q9Y4H4 160 aa16.87■□□□□ 0.29
SRSF1-201ENST00000258962 CFAP20Q9Y6A4 193 aaKnown RBP16.87■□□□□ 0.29
SRSF1-201ENST00000258962 SPAARA0A1B0GVQ0 90 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 E7EQ34 232 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 GSC2O15499 205 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 CBFA2T3O75081 653 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 RASSF9O75901 435 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 PIAS2O75928 621 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 THRAP10827 490 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 CD22P20273 847 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 GPX3P22352 226 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 BLKP51451 505 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 EIF2B5Q13144 721 aaKnown RBP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 FASTKQ14296 549 aaKnown RBP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 CPSF6Q16630 551 aaKnown RBP eCLIP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 C6orf136Q5SQH8 315 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 DUS1LQ6P1R4 473 aaKnown RBP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 ENPP7Q6UWV6 458 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 GK5Q6ZS86 529 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 SPATA19Q7Z5L4 167 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 OR5K2Q8NHB8 316 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 RP9Q8TA86 221 aaKnown RBP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 MAGEC3Q8TD91 643 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 RAD51AP1Q96B01 352 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 WDR92Q96MX6 357 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 OR2M4Q96R27 311 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 INSM2Q96T92 566 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 SGPP1Q9BX95 441 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 C1orf21Q9H246 121 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 OSGEPL1Q9H4B0 414 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 CARS2Q9HA77 564 aaKnown RBP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 AIG1Q9NVV5 245 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 PNMA8BQ9ULN7 279 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 PLAGL1Q9UM63 463 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 TP53BP1Q12888 1972 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 TDRD6O60522 2096 aaKnown RBP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 PSMD12O00232 456 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 IFRD1O00458 451 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 LSM1O15116 133 aaKnown RBP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 KCNJ13O60928 360 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 WFS1O76024 890 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 HALP42357 657 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 PNLIPRP1P54315 467 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 DIO3P55073 304 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 ELF3P78545 371 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 FOXK2Q01167 660 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 PCDH1Q08174 1060 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 CHIT1Q13231 466 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 CUL3Q13618 768 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 RD3Q7Z3Z2 195 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 TRIM46Q7Z4K8 759 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 HID1Q8IV36 788 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 SYTL1Q8IYJ3 562 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 SLC25A45Q8N413 288 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 OR9I1Q8NGQ6 314 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 IL17FQ96PD4 163 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 MENTQ9BUN1 341 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 MMADHCQ9H3L0 296 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 SPASTQ9UBP0 616 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 FTSJ1Q9UET6 329 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 ZNF490Q9ULM2 529 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-201ENST00000258962 SH2B3Q9UQQ2 575 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 GPR45Q9Y5Y3 372 aa16.86■□□□□ 0.29
SRSF1-201ENST00000258962 PCM1Q15154 2024 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 E7ENX8 843 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 UGDHO60701 494 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 ULK1O75385 1050 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 RASGRP1O95267 797 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 LDOC1O95751 146 aaPredicted RBP16.85■□□□□ 0.29
SRSF1-201ENST00000258962 ALPPL2P10696 532 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 ERGP11308 486 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 JUPP14923 745 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 MRPL19P49406 292 aaKnown RBP16.85■□□□□ 0.29
SRSF1-201ENST00000258962 SRP54P61011 504 aaKnown RBP16.85■□□□□ 0.29
SRSF1-201ENST00000258962 ERVK-8P63133 956 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms