RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 KCNAB2Q13303 367 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 USP10Q14694 798 aaKnown RBP6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 UBXN2BQ14CS0 331 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 LRRC41Q15345 812 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 GUF1Q8N442 669 aaKnown RBP6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 UBR7Q8N806 425 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 PCSK9Q8NBP7 692 aaKnown RBP6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 GMCL1P1Q8NEA9 526 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 PCDH19Q8TAB3 1148 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 GTF3C2Q8WUA4 911 aaPredicted RBP6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 ATG4AQ8WYN0 398 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 SPNS1Q9H2V7 528 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 UNKLQ9H9P5 680 aaKnown RBP6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 ARHGAP28Q9P2N2 729 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 RNF24Q9Y225 148 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 PCDHGB2Q9Y5G2 931 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 URADA6NGE7 173 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 H0YGN5 161 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 ITGA3P26006 1051 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 ARNTP27540 789 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 RBM34P42696 430 aaKnown RBP6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 CYP24A1Q07973 514 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 HNF4GQ14541 408 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 MED22Q15528 200 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 LDHDQ86WU2 507 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 TNFAIP8L1Q8WVP5 186 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 HDAC10Q969S8 669 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF700Q9H0M5 742 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 WNT5BQ9H1J7 359 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC38A1Q9H2H9 487 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 MARK1Q9P0L2 795 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC9A2Q9UBY0 812 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 PCYOX1Q9UHG3 505 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 MFHAS1Q9Y4C4 1052 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 NFS1Q9Y697 457 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 ARL5CA6NH57 179 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF487B1APH4 448 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 BCKDKO14874 412 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 OR10H2O60403 315 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 NDUFB10O96000 172 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 PRPS2P11908 318 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 TM4SF1P30408 202 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 HTR3AP46098 478 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 MRPL19P49406 292 aaKnown RBP6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC18A1P54219 525 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 CD81P60033 236 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 CACNB1Q02641 598 aaPredicted RBP6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 GAD2Q05329 585 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 ZNF155Q12901 538 aaPredicted RBP6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 PDZK1IP1Q13113 114 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 SPESP1Q6UW49 350 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 MTURNQ8N3F0 131 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 COLGALT1Q8NBJ5 622 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 TMEM185AQ8NFB2 350 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 SLC7A6Q92536 515 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 HSPA12BQ96MM6 686 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 MBOAT7Q96N66 472 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 RAD9AQ99638 391 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 UNC93B1Q9H1C4 597 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 ANKRD19PQ9H560 264 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 RPS10P5Q9NQ39 176 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 TAS2R10Q9NYW0 307 aa6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 YARS2Q9Y2Z4 477 aaKnown RBP6.59□□□□□ -1.35
PDGFRA-201ENST00000257290 BCL9LQ86UU0 1499 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 ARVCFO00192 962 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 CPN1P15169 458 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 FMO3P31513 532 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 DSG3P32926 999 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 MPIP34949 423 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 GMPSP49915 693 aaPredicted RBP6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 HSDL1Q3SXM5 330 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 MGAT5BQ3V5L5 792 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 PDSS1Q5T2R2 415 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 C1orf185Q5T7R7 199 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 CATSPERGQ6ZRH7 1159 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 NLRP8Q86W28 1048 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 EFHBQ8N7U6 833 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 POMGNT2Q8NAT1 580 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 MARC2Q969Z3 335 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 NTAN1Q96AB6 310 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 OR2M2Q96R28 347 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 UPB1Q9UBR1 384 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 SCP2D1Q9UJQ7 156 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 PLA2G4CQ9UP65 541 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 HPSEQ9Y251 543 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC27A5Q9Y2P5 690 aa6.59□□□□□ -1.36
PDGFRA-201ENST00000257290 SLIT2O94813 1529 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 NR5A2O00482 541 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 IMPA2O14732 288 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 HNRNPDLO14979 420 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ATG12O94817 140 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 AKR7A3O95154 331 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ERCC1P07992 297 aaPredicted RBP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 SMIM18P0DKX4 95 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 BMP6P22004 513 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 PTBP1P26599 531 aaKnown RBP eCLIP6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 POU3F4P49335 361 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 SURF1Q15526 300 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 VPS26BQ4G0F5 336 aa6.58□□□□□ -1.36
PDGFRA-201ENST00000257290 ERN2Q76MJ5 926 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms