RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 ROBO3Q96MS0 1386 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 ITGB8P26012 769 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 GPRC6AQ5T6X5 926 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 GLYATQ6IB77 296 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 ARPINQ7Z6K5 226 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 DDHD1Q8NEL9 900 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 H3BQF6 201 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 SIX3O95343 332 aaPredicted RBP16.47■□□□□ 0.23
SORT1-201ENST00000256637 CCL11P51671 97 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 VHLLQ6RSH7 139 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 OR52E4Q8NGH9 312 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 FRS2Q8WU20 508 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 NUP50Q9UKX7 468 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 EFCAB7A8K855 629 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 GGT5P36269 586 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 EEF1A2Q05639 463 aaKnown RBP16.47■□□□□ 0.23
SORT1-201ENST00000256637 SHHQ15465 462 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 RNF43Q68DV7 783 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 NCBP2-AS2Q69YL0 99 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 KIAA1161Q6NSJ0 714 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 CCDC116Q8IYX3 515 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 ADAD1Q96M93 576 aaKnown RBP16.47■□□□□ 0.23
SORT1-201ENST00000256637 TRPS1Q9UHF7 1281 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 MTRF1O75570 445 aaKnown RBP16.47■□□□□ 0.23
SORT1-201ENST00000256637 AP2A2O94973 939 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 CYBAP13498 195 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 ARHGDIBP52566 201 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 SELENOVP59797 346 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 MRPS35P82673 323 aaKnown RBP16.47■□□□□ 0.23
SORT1-201ENST00000256637 DPY19L3Q6ZPD9 716 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 PRR22Q8IZ63 422 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 C1orf52Q8N6N3 182 aaKnown RBP16.47■□□□□ 0.23
SORT1-201ENST00000256637 MAFAQ8NHW3 353 aaPredicted RBP16.47■□□□□ 0.23
SORT1-201ENST00000256637 CEP44Q9C0F1 390 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 EHD1Q9H4M9 534 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 SLAMF7Q9NQ25 335 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 RARRES3Q9UL19 164 aa16.47■□□□□ 0.23
SORT1-201ENST00000256637 TCRBV7S3A2A0A539 114 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 ANKRD66B4E2M5 251 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 PGAM2P15259 253 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 RFTN1Q14699 578 aaPredicted RBP16.46■□□□□ 0.23
SORT1-201ENST00000256637 FUKQ8N0W3 1084 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 OR1I1O60431 355 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 HNRNPKP61978 463 aaKnown RBP eCLIP16.46■□□□□ 0.233e-7■■□□□ 13.3
SORT1-201ENST00000256637 GALK2Q01415 458 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 SCARB2Q14108 478 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 ARMC3Q5W041 872 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 ASB15Q8WXK1 588 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 ALG3Q92685 438 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 CAVIN3Q969G5 261 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 SLC6A11P48066 632 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 IL18Q14116 193 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 PTGES3Q15185 160 aaKnown RBP16.46■□□□□ 0.23
SORT1-201ENST00000256637 ERVK-18Q9QC07 812 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 ZFR2Q9UPR6 939 aaKnown RBP16.46■□□□□ 0.23
SORT1-201ENST00000256637 LOC102724159A0A0B4J2E5 919 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 ABOP16442 354 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 CD70P32970 193 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 PWP2Q15269 919 aaKnown RBP16.46■□□□□ 0.23
SORT1-201ENST00000256637 ZYG11AQ6WRX3 759 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 CPSF7Q8N684 471 aaKnown RBP16.46■□□□□ 0.23
SORT1-201ENST00000256637 OR10T2Q8NGX3 314 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 PPP4R1LQ9P1A2 415 aa16.46■□□□□ 0.23
SORT1-201ENST00000256637 GABRA3P34903 492 aa16.46■□□□□ 0.22
SORT1-201ENST00000256637 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.46■□□□□ 0.222e-6■■■■□ 20.6
SORT1-201ENST00000256637 CNEP1R1Q8N9A8 125 aa16.46■□□□□ 0.22
SORT1-201ENST00000256637 ORAI3Q9BRQ5 295 aa16.46■□□□□ 0.22
SORT1-201ENST00000256637 TMEM185BQ9H7F4 350 aa16.46■□□□□ 0.22
SORT1-201ENST00000256637 TVP23BQ9NYZ1 205 aa16.46■□□□□ 0.22
SORT1-201ENST00000256637 SSR3Q9UNL2 185 aa16.46■□□□□ 0.22
SORT1-201ENST00000256637 PTRH2Q9Y3E5 179 aaKnown RBP16.46■□□□□ 0.22
SORT1-201ENST00000256637 ZNF217O75362 1048 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 SYVN1Q86TM6 617 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 ZNF781Q8N8C0 355 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 CLEC1AQ8NC01 280 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 LRRC19Q9H756 370 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 PAPSS2O95340 614 aaPredicted RBP16.45■□□□□ 0.22
SORT1-201ENST00000256637 APBB3O95704 486 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 PNLIPRP1P54315 467 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 OR14L1PQ8NHC6 308 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 NFKBIDQ8NI38 313 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 CPT1BQ92523 772 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 CLPTM1LQ96KA5 538 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 C1QTNF1Q9BXJ1 281 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 ZCCHC3Q9NUD5 404 aaKnown RBP16.45■□□□□ 0.22
SORT1-201ENST00000256637 DHRS12A0PJE2 317 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 WRBO00258 174 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 CCR3P51677 355 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 FOXC1Q12948 553 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 MYDGFQ969H8 173 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 PRDM8Q9NQV8 689 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 COPG2Q9UBF2 871 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 NUMBLQ9Y6R0 609 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 HCRTR2O43614 444 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 ITGA5P08648 1049 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 PRKCIP41743 596 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 MTTPP55157 894 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 FUT2Q10981 343 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 KCNJ9Q92806 393 aa16.45■□□□□ 0.22
SORT1-201ENST00000256637 FAM117AQ9C073 453 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms