RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 PRTGQ2VWP7 1150 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 FAM214AQ32MH5 1076 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 SEL1L2Q5TEA6 688 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 AGAP7PQ5VUJ5 663 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 DRICH1Q6PGQ1 229 aaPredicted RBP9.84□□□□□ -0.83
VPS50-201ENST00000251739 SHISA6Q6ZSJ9 500 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 TICAM1Q8IUC6 712 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 OR4N4Q8N0Y3 316 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 TXLNBQ8N3L3 684 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 ARHGEF39Q8N4T4 335 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 TTC29Q8NA56 475 aaPredicted RBP9.84□□□□□ -0.83
VPS50-201ENST00000251739 AGAP4Q96P64 663 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 PANX3Q96QZ0 392 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 MIPEPQ99797 713 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 IL22Q9GZX6 179 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 SOX17Q9H6I2 414 aaPredicted RBP9.84□□□□□ -0.83
VPS50-201ENST00000251739 AGPAT4Q9NRZ5 378 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 SPATA7Q9P0W8 599 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.84□□□□□ -0.83
VPS50-201ENST00000251739 GNPTGQ9UJJ9 305 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 SLC39A10Q9ULF5 831 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 ZNF148Q9UQR1 794 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 HRH3Q9Y5N1 445 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 CACNA1CQ13936 2221 aa9.84□□□□□ -0.83
VPS50-201ENST00000251739 CCDC168Q8NDH2 2452 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 IGKV1-8A0A0C4DH67 115 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 KPNA5O15131 536 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 HPP00738 406 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 IL2RAP01589 272 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 ZSCAN5DPP0CG00 497 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 NMBRP28336 390 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 GPC1P35052 558 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 CCNFP41002 786 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 RNF144AP50876 292 aaPredicted RBP9.83□□□□□ -0.84
VPS50-201ENST00000251739 ADARP55265 1226 aaKnown RBP9.83□□□□□ -0.84
VPS50-201ENST00000251739 VSX2P58304 361 aaPredicted RBP9.83□□□□□ -0.84
VPS50-201ENST00000251739 KLC1Q07866 573 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 MFAP5Q13361 173 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 ZNF169Q14929 603 aaPredicted RBP9.83□□□□□ -0.84
VPS50-201ENST00000251739 RBBP7Q16576 425 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 CCNG2Q16589 344 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.83□□□□□ -0.84
VPS50-201ENST00000251739 WASHC2DQ5SRD0 308 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 ATG9BQ674R7 924 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 ZNF324BQ6AW86 544 aaPredicted RBP9.83□□□□□ -0.84
VPS50-201ENST00000251739 PTRHD1Q6GMV3 140 aaKnown RBP9.83□□□□□ -0.84
VPS50-201ENST00000251739 PRMT9Q6P2P2 845 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 OTOAQ7RTW8 1153 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 METTL27Q8N6F8 245 aaPredicted RBP9.83□□□□□ -0.84
VPS50-201ENST00000251739 STT3BQ8TCJ2 826 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 GRHL3Q8TE85 626 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 FAR1Q8WVX9 515 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 PSMF1Q92530 271 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 CRB3Q9BUF7 120 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 KIFC1Q9BW19 673 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 TTC7AQ9ULT0 858 aaPredicted RBP9.83□□□□□ -0.84
VPS50-201ENST00000251739 MRFAP1Q9Y605 127 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 FAM169AQ9Y6X4 670 aa9.83□□□□□ -0.84
VPS50-201ENST00000251739 NCOA6Q14686 2063 aaPredicted RBP9.83□□□□□ -0.84
VPS50-201ENST00000251739 HYKKA2RU49 373 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 ARHGEF33A8MVX0 844 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 MYO1CO00159 1063 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 PHF2O75151 1096 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 NIPSNAP2O75323 286 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 KLHL18O94889 574 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 ZGLP1P0C6A0 271 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 COX6A1P12074 109 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 EDN3P14138 238 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 ACPPP15309 386 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 GLRBP48167 497 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 CARSP49589 748 aaKnown RBP9.82□□□□□ -0.84
VPS50-201ENST00000251739 EIF3BP55884 814 aaKnown RBP9.82□□□□□ -0.84
VPS50-201ENST00000251739 SESN2P58004 480 aaPredicted RBP9.82□□□□□ -0.84
VPS50-201ENST00000251739 SNX1Q13596 522 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 FASTKQ14296 549 aaKnown RBP9.82□□□□□ -0.84
VPS50-201ENST00000251739 NAA25Q14CX7 972 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 TLR1Q15399 786 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 MUM1Q2TAK8 710 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 MEI1Q5TIA1 1274 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 ZNF425Q6IV72 752 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 RPUSD3Q6P087 351 aaKnown RBP9.82□□□□□ -0.84
VPS50-201ENST00000251739 TTC23LQ6PF05 361 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 CNSTQ6PJW8 725 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 ISLR2Q6UXK2 745 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 PAQR7Q86WK9 346 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 AMER3Q8N944 861 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 CCDC89Q8N998 374 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 DNAJB14Q8TBM8 379 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 RNF217Q8TC41 542 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 MFSD3Q96ES6 412 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 MVB12AQ96EY5 273 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 THOC3Q96J01 351 aaKnown RBP9.82□□□□□ -0.84
VPS50-201ENST00000251739 VPS50Q96JG6 964 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 LMF1Q96S06 567 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 ZFYVE21Q9BQ24 234 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 EPS8L2Q9H6S3 715 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 ZNF304Q9HCX3 659 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 ZNF282Q9UDV7 671 aaPredicted RBP9.82□□□□□ -0.84
VPS50-201ENST00000251739 ANAPC5Q9UJX4 755 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 DRG1Q9Y295 367 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms