RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 SBSNQ6UWP8 590 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 ADAMTSL2Q86TH1 951 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 SYVN1Q86TM6 617 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 GBP5Q96PP8 586 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 CYTH2Q99418 400 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 HAUS8Q9BT25 410 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 DERL2Q9GZP9 239 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 ABCF3Q9NUQ8 709 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 TMEM184CQ9NVA4 438 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 NINJ2Q9NZG7 142 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 CTNNAL1Q9UBT7 734 aa23.32■■□□□ 1.32
SDF2L1-201ENST00000248958 FITM1A5D6W6 292 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 WISP3O95389 354 aaPredicted RBP23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 GCGRP47871 477 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 VSX2P58304 361 aaPredicted RBP23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 RAB10P61026 200 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 YBX1P67809 324 aaKnown RBP23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 DCDP81605 110 aaKnown RBP23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 NAE1Q13564 534 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 ZKSCAN8Q15776 578 aaPredicted RBP23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 SOWAHCQ53LP3 525 aaPredicted RBP23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 WASHC2DQ5SRD0 308 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 C16orf46Q6P387 395 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 OR56A3Q8NH54 315 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 MED8Q96G25 268 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 ARHGAP9Q9BRR9 750 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 SGPP1Q9BX95 441 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 FUT8Q9BYC5 575 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 ATG10Q9H0Y0 220 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 ACTL8Q9H568 366 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 PADI2Q9Y2J8 665 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 OARD1Q9Y530 152 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 NBEAQ8NFP9 2946 aa23.31■■□□□ 1.32
SDF2L1-201ENST00000248958 IGKV1-8A0A0C4DH67 115 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 TXNDC9O14530 226 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 CTSBP07858 339 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 ANXA5P08758 320 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 PIM1P11309 404 aaPredicted RBP23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 ECHS1P30084 290 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 EMP3P54852 163 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 ATP6V0D1P61421 351 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 COL9A2Q14055 689 aaPredicted RBP23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 SLMAPQ14BN4 828 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 TBR1Q16650 682 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 PPP1R3AQ16821 1122 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 PTCHD3Q3KNS1 767 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 BORAQ6PGQ7 559 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 MBOAT1Q6ZNC8 495 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 ANKRD49Q8WVL7 239 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 CDC42EP4Q9H3Q1 356 aaKnown RBP23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 ACSS3Q9H6R3 686 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 CAB39LQ9H9S4 337 aa23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 DHCR7Q9UBM7 475 aaKnown RBP23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 GPN3Q9UHW5 284 aaPredicted RBP23.3■■□□□ 1.32
SDF2L1-201ENST00000248958 A0A1B0GX78 115 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 EIF4E1BA6NMX2 242 aaKnown RBP23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 CDC7O00311 574 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 GUCA1CO95843 209 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 PRKAR1AP10644 381 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 ERV3-1Q14264 604 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 NCF4Q15080 339 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 FRMPD2BQ6IN97 320 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 LCN10Q6JVE6 187 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 FAM198BQ6UWH4 519 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 FRA10AC1Q70Z53 315 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 ADCK2Q7Z695 626 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 CCDC91Q7Z6B0 441 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 C17orf64Q86WR6 236 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 ENDOVQ8N8Q3 282 aaKnown RBP23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 SLC39A7Q92504 469 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 EXTL1Q92935 676 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 RERGQ96A58 199 aaPredicted RBP23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 CUTCQ9NTM9 273 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 BAHCC1Q9P281 2608 aa23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 MDC1Q14676 2089 aaKnown RBP23.29■■□□□ 1.32
SDF2L1-201ENST00000248958 NPEPPSL1A6NEC2 478 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 DSCR3O14972 297 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 CAPN1P07384 714 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 CCDC166P0CW27 439 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 ALAS2P22557 587 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 CRABP2P29373 138 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 HNMTP50135 292 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 UGT8Q16880 541 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 LINC00303Q3SY05 128 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 PCSK4Q6UW60 755 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 TTLL10Q6ZVT0 673 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 ALKBH8Q96BT7 664 aaKnown RBP23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 THAP11Q96EK4 314 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 BBC3Q96PG8 261 aaPredicted RBP23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 OR2A5Q96R48 311 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 L2HGDHQ9H9P8 463 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 CUEDC1Q9NWM3 386 aaPredicted RBP23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 IFT80Q9P2H3 777 aaPredicted RBP23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 NDOR1Q9UHB4 597 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 IKZF3Q9UKT9 509 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 POLHQ9Y253 713 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 SEC16AO15027 2179 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 FER1L5A0AVI2 2057 aa23.28■■□□□ 1.32
SDF2L1-201ENST00000248958 LOC105369274A0A096LPK9 316 aa23.27■■□□□ 1.32
SDF2L1-201ENST00000248958 LOC102723532A0A0G2JNH3 316 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms