RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 OR1E2P47887 323 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 NCS1P62166 190 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 PPP2R2BQ00005 443 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 Q6ZPB1 254 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 TAGAPQ8N103 731 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 ASZ1Q8WWH4 475 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 ZNF641Q96N77 438 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 YME1L1Q96TA2 773 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 CPPED1Q9BRF8 314 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 EMILIN2Q9BXX0 1053 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 TPT1P8Q9HAU6 139 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 THG1LQ9NWX6 298 aaKnown RBP12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 AP3M1Q9Y2T2 418 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 PTPRDP23468 1912 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 TRAV19A0A0A6YYK7 116 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 AGRPO00253 132 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 SOD2P04179 222 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 LHCGRP22888 699 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 TPP2P29144 1249 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 ETV3P41162 512 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 VLDLRP98155 873 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 EMX1Q04741 257 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 CYP4Z1Q86W10 505 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 OR5AK3PQ8NH89 298 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 DUSP26Q9BV47 211 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 ABCB10Q9NRK6 738 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 ADPRHL2Q9NX46 363 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 THUMPD1Q9NXG2 353 aaKnown RBP12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 SPG21Q9NZD8 308 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 FZD4Q9ULV1 537 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 SH3GLB1Q9Y371 365 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 AREL1O15033 823 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 UGT2B11O75310 529 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 VIPP01282 170 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 PRPS1L1P21108 318 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 KDELR2P33947 212 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 CHI3L1P36222 383 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 EIF2B2P49770 351 aaKnown RBP12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 DNASE1L3Q13609 305 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 INAQ16352 499 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 DGUOKQ16854 277 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 VMACQ2NL98 169 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 XAF1Q6GPH4 301 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 ADNP2Q6IQ32 1131 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 LRRC70Q7Z2Q7 622 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 TRIM74Q86UV6 250 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 TRAPPC5Q8IUR0 188 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 NDNFQ8TB73 568 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 CSGALNACT1Q8TDX6 532 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 ZHX1-C8orf76Q96EF9 292 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 CMTM7Q96FZ5 175 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 WRAP53Q9BUR4 548 aaKnown RBP12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 RIOK2Q9BVS4 552 aaKnown RBP12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 VN1R3Q9BXE9 311 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 POLE4Q9NR33 117 aa12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 PAIP2BQ9ULR5 123 aaKnown RBP12.23□□□□□ -0.45
RAB3IP-201ENST00000247833 NLRC5Q86WI3 1866 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 GRXCR2A6NFK2 248 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 FAM220BPB1ANY3 271 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 H0Y858 1186 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 AXIN1O15169 862 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 SOCS5O75159 536 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 CATP04040 527 aaKnown RBP12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 C8GP07360 202 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 RETP07949 1114 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 MEF2AQ02078 507 aaPredicted RBP12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 DUOXA1Q1HG43 343 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 TPGS2Q68CL5 300 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 TRMT11Q7Z4G4 463 aaKnown RBP12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 TRIM46Q7Z4K8 759 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 IGFN1Q86VF2 1251 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 RAVER1Q8IY67 606 aaKnown RBP12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 LILRA3Q8N6C8 439 aaPredicted RBP12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 OR4A15Q8NGL6 344 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 CLP1Q92989 425 aaKnown RBP12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 SCRN2Q96FV2 425 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 CCL27Q9Y4X3 112 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 BACE2Q9Y5Z0 518 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 GMEB1Q9Y692 573 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 NINQ8N4C6 2090 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 MYOFQ9NZM1 2061 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 E7EQ34 232 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 TEX28O15482 410 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 SEC14L2O76054 403 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 CPZQ66K79 652 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 ZNF783Q6ZMS7 281 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 TMEM25Q86YD3 366 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 RPL3LQ92901 407 aaKnown RBP12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 TAMM41Q96BW9 452 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 CCDC115Q96NT0 180 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 CSF3RQ99062 836 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 RERGLQ9H628 205 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 EXOSC4Q9NPD3 245 aaKnown RBP12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 INTS6Q9UL03 887 aaKnown RBP12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 FAM32AQ9Y421 112 aaKnown RBP12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 MAP4K5Q9Y4K4 846 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 KPNA4O00629 521 aaPredicted RBP12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 WNT9AO14904 365 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 ZNF12P17014 697 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 CD9P21926 228 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms