RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ZNF12P17014 697 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 CD22P20273 847 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 CRHBPP24387 322 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 HALP42357 657 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 PRLHRP49683 370 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 MTAPQ13126 283 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 ZNF648Q5T619 568 aaPredicted RBP21.25■□□□□ 0.99
RNF39-201ENST00000244360 RAVER1Q8IY67 606 aaKnown RBP21.25■□□□□ 0.99
RNF39-201ENST00000244360 TMEM132CQ8N3T6 1108 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 RASGEF1AQ8N9B8 481 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 GLYATL1Q969I3 302 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 SLC47A1Q96FL8 570 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 RAD9AQ99638 391 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 OSBPL10Q9BXB5 764 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 TOR3AQ9H497 397 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 MAGIXQ9H6Y5 334 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 GPN2Q9H9Y4 310 aaPredicted RBP21.25■□□□□ 0.99
RNF39-201ENST00000244360 LIMD1Q9UGP4 676 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 MKI67P46013 3256 aaKnown RBP21.24■□□□□ 0.99
RNF39-201ENST00000244360 TSPAN6O43657 245 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 INHBBP09529 407 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 IL1RNP18510 177 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 CTSCP53634 463 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 ANKRD26P1Q6NSI1 321 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 NOXRED1Q6NXP6 359 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 PHACTR4Q8IZ21 702 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 FBXO30Q8TB52 745 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 INPP5KQ9BT40 448 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 TBCDQ9BTW9 1192 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 DCAF13Q9NV06 445 aaKnown RBP21.24■□□□□ 0.99
RNF39-201ENST00000244360 PRRC2BQ5JSZ5 2229 aaKnown RBP21.24■□□□□ 0.99
RNF39-201ENST00000244360 SLC5A10A0PJK1 596 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 WNT9AO14904 365 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 DNAJB5O75953 348 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 CST1P01037 141 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 EPCAMP16422 314 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 TPD52P55327 224 aaPredicted RBP21.24■□□□□ 0.99
RNF39-201ENST00000244360 LIPIQ6XZB0 460 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 GCNT7Q6ZNI0 430 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 THOC6Q86W42 341 aaKnown RBP21.24■□□□□ 0.99
RNF39-201ENST00000244360 NRSN1Q8IZ57 195 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 WDR20Q8TBZ3 569 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 ATL1Q8WXF7 558 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 APOLD1Q96LR9 279 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 NAA50Q9GZZ1 169 aaKnown RBP21.24■□□□□ 0.99
RNF39-201ENST00000244360 FAM118AQ9NWS6 357 aa21.24■□□□□ 0.99
RNF39-201ENST00000244360 CHCHD3Q9NX63 227 aaKnown RBP21.24■□□□□ 0.99
RNF39-201ENST00000244360 PRMT3O60678 531 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 ATG13O75143 517 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 PCNAP12004 261 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 CEBPBP17676 345 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 XPAP23025 273 aaPredicted RBP21.23■□□□□ 0.99
RNF39-201ENST00000244360 POLR2IP36954 125 aaKnown RBP21.23■□□□□ 0.99
RNF39-201ENST00000244360 C21orf59P57076 290 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 PPP2R2BQ00005 443 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 IRF8Q02556 426 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 DHCR24Q15392 516 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 CHST15Q7LFX5 561 aaPredicted RBP21.23■□□□□ 0.99
RNF39-201ENST00000244360 ADHFE1Q8IWW8 467 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 C10orf111Q8N326 155 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 WFIKKN2Q8TEU8 576 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 FAM162AQ96A26 154 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 CCDC138Q96M89 665 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 SPATA6Q9NWH7 488 aaPredicted RBP21.23■□□□□ 0.99
RNF39-201ENST00000244360 CREG1O75629 220 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 CYP17A1P05093 508 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 MATN1P21941 496 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 C21orf58P58505 322 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 PON2Q15165 354 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 DPY19L1Q2PZI1 675 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 SYTL3Q4VX76 610 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 XAF1Q6GPH4 301 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 PARS2Q7L3T8 475 aaKnown RBP21.23■□□□□ 0.99
RNF39-201ENST00000244360 ARMC5Q96C12 935 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 FAM120BQ96EK7 910 aaKnown RBP21.23■□□□□ 0.99
RNF39-201ENST00000244360 REXO5Q96IC2 774 aaKnown RBP21.23■□□□□ 0.99
RNF39-201ENST00000244360 EGLN2Q96KS0 407 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 CCM2Q9BSQ5 444 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 ADNPQ9H2P0 1102 aa21.23■□□□□ 0.99
RNF39-201ENST00000244360 STOX2Q9P2F5 926 aaPredicted RBP21.23■□□□□ 0.99
RNF39-201ENST00000244360 PSMD11O00231 422 aa21.22■□□□□ 0.99
RNF39-201ENST00000244360 GNGT2O14610 69 aa21.22■□□□□ 0.99
RNF39-201ENST00000244360 BCL10O95999 233 aa21.22■□□□□ 0.99
RNF39-201ENST00000244360 HNRNPCP07910 306 aaKnown RBP eCLIP21.22■□□□□ 0.99
RNF39-201ENST00000244360 PRPS1L1P21108 318 aa21.22■□□□□ 0.99
RNF39-201ENST00000244360 CDKN2CP42773 168 aa21.22■□□□□ 0.99
RNF39-201ENST00000244360 MAPK9P45984 424 aa21.22■□□□□ 0.99
RNF39-201ENST00000244360 ABHD18Q0P651 414 aa21.22■□□□□ 0.99
RNF39-201ENST00000244360 R3HCC1LQ7Z5L2 792 aaKnown RBP21.22■□□□□ 0.99
RNF39-201ENST00000244360 GRASPQ7Z6J2 395 aaPredicted RBP21.22■□□□□ 0.99
RNF39-201ENST00000244360 TMEM159Q96B96 161 aa21.22■□□□□ 0.99
RNF39-201ENST00000244360 C3orf18Q9UK00 162 aa21.22■□□□□ 0.99
RNF39-201ENST00000244360 PSME2Q9UL46 239 aa21.22■□□□□ 0.99
RNF39-201ENST00000244360 TMX2-CTNND1H3BSU7 103 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 PER2O15055 1255 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 MAGEB3O15480 346 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 PRKD3O94806 890 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 B3GALT4O96024 378 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 ELFN1P0C7U0 828 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 DGKGP49619 791 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms