RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 GRHL1Q9NZI5 618 aa13.19□□□□□ -0.3
DDX39A-201ENST00000242776 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.19□□□□□ -0.3
DDX39A-201ENST00000242776 MTRF1LQ9UGC7 380 aaKnown RBP13.19□□□□□ -0.3
DDX39A-201ENST00000242776 TCRBV7S3A2A0A539 114 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 DYTNA2CJ06 578 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 AGAP14A8MT82 685 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 BHMG1C9JSJ3 638 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-201ENST00000242776 C19orf84I3L1E1 186 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 FFAR3O14843 346 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 DSCR3O14972 297 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 GPR42O15529 346 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 CELA2AP08217 269 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 PIM1P11309 404 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-201ENST00000242776 ACRV1P26436 265 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 MST1P26927 711 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 ARSFP54793 590 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 PLTPP55058 493 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 RPA4Q13156 261 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 SLC5A12Q1EHB4 618 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 ZNF630Q2M218 657 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-201ENST00000242776 SYTL3Q4VX76 610 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 ZNF324BQ6AW86 544 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-201ENST00000242776 FAAH2Q6GMR7 532 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 RANBP10Q6VN20 620 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 CEP128Q6ZU80 1094 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 ZNF808Q8N4W9 903 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-201ENST00000242776 OR52K1Q8NGK4 314 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 CFAP61Q8NHU2 1237 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 BRIX1Q8TDN6 353 aaKnown RBP13.18□□□□□ -0.3
DDX39A-201ENST00000242776 HEXDCQ8WVB3 486 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 IFT81Q8WYA0 676 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 IL17FQ96PD4 163 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 TSPYL1Q9H0U9 437 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 ARNT2Q9HBZ2 717 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 MRM3Q9HC36 420 aaKnown RBP13.18□□□□□ -0.3
DDX39A-201ENST00000242776 CHST11Q9NPF2 352 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 SEC14L3Q9UDX4 400 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 CACNA1CQ13936 2221 aa13.18□□□□□ -0.3
DDX39A-201ENST00000242776 GOLGA8MH3BSY2 632 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 MAP2K7O14733 419 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 WISP2O76076 250 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 TUBBP07437 444 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 ACPPP15309 386 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 TPH1P17752 444 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 ARL4CP56559 192 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 PMP22Q01453 160 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 EEF1A2Q05639 463 aaKnown RBP13.17□□□□□ -0.3
DDX39A-201ENST00000242776 DBN1Q16643 649 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 ERCC6LQ2NKX8 1250 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 DNAJC21Q5F1R6 531 aaKnown RBP13.17□□□□□ -0.3
DDX39A-201ENST00000242776 RPUSD3Q6P087 351 aaKnown RBP13.17□□□□□ -0.3
DDX39A-201ENST00000242776 PIANPQ8IYJ0 282 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 TBC1D21Q8IYX1 336 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 ZNF295-AS1Q8N0V1 137 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 PDIK1LQ8N165 341 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 EIF1ADQ8N9N8 165 aaKnown RBP13.17□□□□□ -0.3
DDX39A-201ENST00000242776 SERPINB12Q96P63 405 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 LMF1Q96S06 567 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 YIPF2Q9BWQ6 316 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 PHACTR1Q9C0D0 580 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 ANKZF1Q9H8Y5 726 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 WDR54Q9H977 334 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 SEMA3GQ9NS98 782 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 PIH1D1Q9NWS0 290 aaKnown RBP13.17□□□□□ -0.3
DDX39A-201ENST00000242776 OR6C2Q9NZP2 312 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 BFARQ9NZS9 450 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.17□□□□□ -0.3
DDX39A-201ENST00000242776 V9GYY5 206 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-201ENST00000242776 CPAMD8Q8IZJ3 1885 aa13.17□□□□□ -0.3
DDX39A-201ENST00000242776 IGLV3-16A0A075B6K0 115 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 MED26O95402 600 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 HPP00738 406 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 ALBP02768 609 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 ACADLP28330 430 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 NPY2RP49146 381 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 ST13P50502 369 aaKnown RBP13.16□□□□□ -0.3
DDX39A-201ENST00000242776 VSX2P58304 361 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-201ENST00000242776 KLC1Q07866 573 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 ARMC3Q5W041 872 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 KBTBD2Q8IY47 623 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 TTC29Q8NA56 475 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-201ENST00000242776 OR5K2Q8NHB8 316 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 FBXO25Q8TCJ0 367 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.16□□□□□ -0.34e-8■■■■■ 36.3
DDX39A-201ENST00000242776 FMO2Q99518 471 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 SELENOSQ9BQE4 189 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 POLG2Q9UHN1 485 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 C3orf18Q9UK00 162 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 NSG1A0A0A6YYJ2 146 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 TRAV17A0A0B4J275 112 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 OR51F1A6NGY5 319 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 EIF3HO15372 352 aaKnown RBP eCLIP13.16□□□□□ -0.3
DDX39A-201ENST00000242776 RASAL1O95294 804 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 ESRRAP11474 423 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-201ENST00000242776 NSG1P42857 185 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 CA7P43166 264 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 GCGRP47871 477 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 CARSP49589 748 aaKnown RBP13.16□□□□□ -0.3
DDX39A-201ENST00000242776 TNFSF10P50591 281 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 ADORA2A-AS1P86434 159 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms