RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 C21orf58P58505 322 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 SGCGQ13326 291 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 TSTA3Q13630 321 aaPredicted RBP22.49■■□□□ 1.19
MSX2-201ENST00000239243 LRRC56Q8IYG6 542 aaPredicted RBP22.49■■□□□ 1.19
MSX2-201ENST00000239243 HUS1BQ8NHY5 278 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 GANCQ8TET4 914 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 TFGQ92734 400 aaPredicted RBP22.49■■□□□ 1.19
MSX2-201ENST00000239243 C1QTNF7Q9BXJ2 289 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 PRM3Q9NNZ6 103 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 FBXL12Q9NXK8 326 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 MAGEB17A8MXT2 336 aa22.48■■□□□ 1.19
MSX2-201ENST00000239243 HSD17B2P37059 387 aa22.48■■□□□ 1.19
MSX2-201ENST00000239243 KIR3DL1P43629 444 aa22.48■■□□□ 1.19
MSX2-201ENST00000239243 ASMTP46597 345 aa22.48■■□□□ 1.19
MSX2-201ENST00000239243 HTR4Q13639 388 aa22.48■■□□□ 1.19
MSX2-201ENST00000239243 IRF4Q15306 451 aa22.48■■□□□ 1.19
MSX2-201ENST00000239243 PGS1Q32NB8 556 aa22.48■■□□□ 1.19
MSX2-201ENST00000239243 METRNLQ641Q3 311 aa22.48■■□□□ 1.19
MSX2-201ENST00000239243 RNF175Q8N4F7 328 aa22.48■■□□□ 1.19
MSX2-201ENST00000239243 PAPD5Q8NDF8 572 aaKnown RBP22.48■■□□□ 1.19
MSX2-201ENST00000239243 OR2T12Q8NG77 320 aa22.48■■□□□ 1.19
MSX2-201ENST00000239243 SLC5A11Q8WWX8 675 aa22.48■■□□□ 1.19
MSX2-201ENST00000239243 EZH1Q92800 747 aaPredicted RBP22.48■■□□□ 1.19
MSX2-201ENST00000239243 FAM131CQ96AQ9 280 aa22.48■■□□□ 1.19
MSX2-201ENST00000239243 C11orf24Q96F05 449 aaPredicted RBP22.48■■□□□ 1.19
MSX2-201ENST00000239243 ZNF583Q96ND8 569 aa22.48■■□□□ 1.19
MSX2-201ENST00000239243 LMCD1Q9NZU5 365 aa22.48■■□□□ 1.19
MSX2-201ENST00000239243 PPT2Q9UMR5 302 aa22.48■■□□□ 1.19
MSX2-201ENST00000239243 TRBV5-3A0A0A0MS03 114 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 ZNF26P17031 533 aaPredicted RBP22.47■■□□□ 1.19
MSX2-201ENST00000239243 MTAPQ13126 283 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 ARHGAP19Q14CB8 494 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 HMBOX1Q6NT76 420 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 LAS2Q8IYD9 372 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 TBC1D21Q8IYX1 336 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 UBE2E3Q969T4 207 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 GBP5Q96PP8 586 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 HAUS8Q9BT25 410 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 PAIP1Q9H074 479 aaKnown RBP22.47■■□□□ 1.19
MSX2-201ENST00000239243 MBNL1Q9NR56 388 aaKnown RBP22.47■■□□□ 1.19
MSX2-201ENST00000239243 AGPAT4Q9NRZ5 378 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 ZFR2Q9UPR6 939 aaKnown RBP22.47■■□□□ 1.19
MSX2-201ENST00000239243 PCYT1BQ9Y5K3 369 aaPredicted RBP22.47■■□□□ 1.19
MSX2-201ENST00000239243 RANBP2P49792 3224 aaKnown RBP22.47■■□□□ 1.19
MSX2-201ENST00000239243 FOXE1O00358 373 aaPredicted RBP22.47■■□□□ 1.19
MSX2-201ENST00000239243 PLRG1O43660 514 aaKnown RBP22.47■■□□□ 1.19
MSX2-201ENST00000239243 LYNP07948 512 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 GGT1P19440 569 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 HRH2P25021 359 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 THEMIS2Q5TEJ8 643 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 AMIGO2Q86SJ2 522 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 TP53I13Q8NBR0 393 aaPredicted RBP22.47■■□□□ 1.19
MSX2-201ENST00000239243 SPDYE1Q8NFV5 336 aaPredicted RBP22.47■■□□□ 1.19
MSX2-201ENST00000239243 C1QTNF2Q9BXJ5 285 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 EBPLQ9BY08 206 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 PIF1Q9H611 641 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 RPF2Q9H7B2 306 aaKnown RBP22.47■■□□□ 1.19
MSX2-201ENST00000239243 SERHLQ9NQF3 203 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 SLC25A37Q9NYZ2 338 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 SLC23A2Q9UGH3 650 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 ACSL5Q9ULC5 683 aa22.47■■□□□ 1.19
MSX2-201ENST00000239243 ANHXE9PGG2 379 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 PAK4O96013 591 aaPredicted RBP22.46■■□□□ 1.19
MSX2-201ENST00000239243 OXTRP30559 389 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 PHC1P78364 1004 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 SLBPQ14493 270 aaKnown RBP eCLIP22.46■■□□□ 1.19
MSX2-201ENST00000239243 LCTLQ6UWM7 567 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 DNAJC14Q6Y2X3 702 aaPredicted RBP22.46■■□□□ 1.19
MSX2-201ENST00000239243 MSRB3Q8IXL7 192 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 GALNT4Q8N4A0 578 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 MARVELD2Q8N4S9 558 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 OR5K2Q8NHB8 316 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 NELL1Q92832 810 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 EGLN2Q96KS0 407 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 SCML1Q9UN30 329 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 INVSQ9Y283 1065 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 SMNDC1O75940 238 aaKnown RBP eCLIP22.46■■□□□ 1.19
MSX2-201ENST00000239243 LRATO95237 230 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 ANXA6P08133 673 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 UBTFL6P0CB48 400 aaPredicted RBP22.46■■□□□ 1.19
MSX2-201ENST00000239243 MYCLP1P12525 358 aaPredicted RBP22.46■■□□□ 1.19
MSX2-201ENST00000239243 CTHP32929 405 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 POLE2P56282 527 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 PHEXP78562 749 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 TMEM196Q5HYL7 178 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 PRAMEF14Q5SWL7 426 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 CATSPEREQ5SY80 951 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 PRAMEF13Q5VWM6 474 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 KIAA1211LQ6NV74 962 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 NXPE4Q6UWF7 544 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 DTWD1Q8N5C7 304 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 OR5AR1Q8NGP9 310 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 BIRC7Q96CA5 298 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 MKRN2Q9H000 416 aaKnown RBP22.46■■□□□ 1.19
MSX2-201ENST00000239243 COQ10BQ9H8M1 238 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 GORASP2Q9H8Y8 452 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 C8orf4Q9NR00 106 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 PCDHB14Q9Y5E9 798 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 AP4B1Q9Y6B7 739 aa22.46■■□□□ 1.19
MSX2-201ENST00000239243 PIPSLA2A3N6 862 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms