RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 ST13P5Q8NFI4 369 aaPredicted RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 DYNC2LI1Q8TCX1 351 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 HTRA1Q92743 480 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 PDLIM5Q96HC4 596 aaKnown RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SERPINB11Q96P15 392 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 ZNF300Q96RE9 604 aaPredicted RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 ING2Q9H160 280 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 TOR3AQ9H497 397 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 DUSP21Q9H596 190 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 POLE4Q9NR33 117 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 TMEM30AQ9NV96 361 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 NUDT4Q9NZJ9 180 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 CCDC59Q9P031 241 aaKnown RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SLCO3A1Q9UIG8 710 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 C3orf18Q9UK00 162 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 BTRCQ9Y297 605 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 MRPS7Q9Y2R9 242 aaKnown RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 FIS1Q9Y3D6 152 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 TNPO3Q9Y5L0 923 aaKnown RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SNX10Q9Y5X0 201 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SNX5Q9Y5X3 404 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 ACTL7AQ9Y615 435 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 PMF1-BGLAPU3KQ54 211 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SCN5AQ14524 2016 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 TRBV5-3A0A0A0MS03 114 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 CLDN24A6NM45 220 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 E9PAM4 449 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 H0Y626 953 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SOAT2O75908 522 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 KCNH1O95259 989 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 GLP2RO95838 553 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 CHRM3P20309 590 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 HTR1BP28222 390 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 ELK4P28324 431 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 TRHRP34981 398 aaPredicted RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 ARSDP51689 593 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 OR2B6P58173 313 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 OR4D2P58180 307 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 EEF1A1P68104 462 aaKnown RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 EEF1A2Q05639 463 aaKnown RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 PCBP2Q15366 365 aaKnown RBP eCLIP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 RABL3Q5HYI8 236 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 TOR1AIP1Q5JTV8 583 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SIRPB2Q5JXA9 342 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 EEF1A1P5Q5VTE0 462 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 ZNF782Q6ZMW2 699 aaPredicted RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 MSANTD1Q6ZTZ1 278 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 DET1Q7L5Y6 550 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 GPR149Q86SP6 731 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SLCO6A1Q86UG4 719 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 CALHM3Q86XJ0 350 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 ZDHHC13Q8IUH4 622 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 DTWD1Q8N5C7 304 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 C3orf58Q8NDZ4 430 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 OR4D10Q8NGI6 311 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 ITFG1Q8TB96 612 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 PROKR1Q8TCW9 393 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 FAR1Q8WVX9 515 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 RTP3Q9BQQ7 232 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 NXF2Q9GZY0 626 aaKnown RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 WNT5BQ9H1J7 359 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 NLE1Q9NVX2 485 aaPredicted RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 FBXL12Q9NXK8 326 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 EXTL2Q9UBQ6 330 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 LAMP5Q9UJQ1 280 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 COPS3Q9UNS2 423 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 ZFR2Q9UPR6 939 aaKnown RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 BOLA1Q9Y3E2 137 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 HRH3Q9Y5N1 445 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 G3V2T6 193 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 CD3EAPO15446 510 aaKnown RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 PMPCBO75439 489 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 WDR47O94967 919 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 DLGAP3O95886 979 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SMIM10L2AP0DMW4 78 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SMIM10L2BP0DMW5 78 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SRCP12931 536 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 ACPPP15309 386 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 VAMP1P23763 118 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 STARP49675 285 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 DGKQP52824 942 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 PLK1P53350 603 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 CSNK2BP67870 215 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 MAD2L1Q13257 205 aaPredicted RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SETMARQ53H47 684 aaPredicted RBP6.13□□□□□ -1.43
SGIP1-201ENST00000237247 LDLRAP1Q5SW96 308 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 ATG9BQ674R7 924 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SULT1C3Q6IMI6 304 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 AFTPHQ6ULP2 937 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 GDPD3Q7L5L3 318 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SYVN1Q86TM6 617 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 P3H2Q8IVL5 708 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 ADHFE1Q8IWW8 467 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 FCGR1BQ92637 280 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 MYLPFQ96A32 169 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 ZHX1-C8orf76Q96EF9 292 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 NODALQ96S42 347 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 AMBRA1Q9C0C7 1298 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SHARPINQ9H0F6 387 aa6.13□□□□□ -1.43
SGIP1-201ENST00000237247 SPON1Q9HCB6 807 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms