RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 AP1M2Q9Y6Q5 423 aa10.85□□□□□ -0.67
SF3B6-201ENST00000233468 SYCE1LA8MT33 242 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 TMEM150CB9EJG8 249 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 E7EQ34 232 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 J3QKU1 62 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 PRICKLE3O43900 615 aaPredicted RBP10.84□□□□□ -0.67
SF3B6-201ENST00000233468 SRPX2O60687 465 aaPredicted RBP10.84□□□□□ -0.67
SF3B6-201ENST00000233468 CPNE3O75131 537 aaKnown RBP10.84□□□□□ -0.67
SF3B6-201ENST00000233468 SCRG1O75711 98 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 STK17BO94768 372 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 SNRPAP09012 282 aaKnown RBP10.84□□□□□ -0.67
SF3B6-201ENST00000233468 LTA4HP09960 611 aaKnown RBP10.84□□□□□ -0.67
SF3B6-201ENST00000233468 FAM153BP0C7A2 387 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 MAGP20916 626 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 IMPA1P29218 277 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 GRK3P35626 688 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 ITGA1P56199 1179 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 RELAQ04206 551 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 FASTKQ14296 549 aaKnown RBP10.84□□□□□ -0.67
SF3B6-201ENST00000233468 CSHL1Q14406 222 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 SLC29A2Q14542 456 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 KCNAB1Q14722 419 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 FAM153CQ494X1 144 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 TCTE1Q5JU00 501 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 ICE2Q659A1 982 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 TLDC1Q6P9B6 456 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 BRICD5Q6PL45 260 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 SUSD1Q6UWL2 747 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 TMEM207Q6UWW9 146 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 C6orf15Q6UXA7 325 aaPredicted RBP10.84□□□□□ -0.67
SF3B6-201ENST00000233468 GPSM1Q86YR5 675 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 NLGN4XQ8N0W4 816 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 IL22RA1Q8N6P7 574 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 NLGN4YQ8NFZ3 816 aaPredicted RBP10.84□□□□□ -0.67
SF3B6-201ENST00000233468 OR2A1Q8NGT9 310 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 FLVCR1-AS1Q8TAF5 88 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 UHMK1Q8TAS1 419 aaKnown RBP10.84□□□□□ -0.67
SF3B6-201ENST00000233468 ANKRD49Q8WVL7 239 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 DLG3Q92796 817 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 KIAA1143Q96AT1 154 aaPredicted RBP10.84□□□□□ -0.67
SF3B6-201ENST00000233468 MED8Q96G25 268 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 UBXN10Q96LJ8 280 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 PPM1MQ96MI6 270 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 NRTNQ99748 197 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 ACAT2Q9BWD1 397 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 CAPS2Q9BXY5 557 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 TXLNGYQ9BZA5 131 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 FAM117AQ9C073 453 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 SNX15Q9NRS6 342 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 FOXJ2Q9P0K8 574 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 TAC3Q9UHF0 121 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 RNF112Q9ULX5 631 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 TMEM184BQ9Y519 407 aaPredicted RBP10.84□□□□□ -0.67
SF3B6-201ENST00000233468 HECTD1Q9ULT8 2610 aa10.84□□□□□ -0.67
SF3B6-201ENST00000233468 MAST4O15021 2626 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 A0A096LPK6 155 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 A0A1W2PPV9 198 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 NPEPPSL1A6NEC2 478 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 K7ENP7 123 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 CDC7O00311 574 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 TXNDC9O14530 226 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 RAD1O60671 282 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 OR2B3O76000 313 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 IPO13O94829 963 aaKnown RBP10.83□□□□□ -0.68
SF3B6-201ENST00000233468 WISP3O95389 354 aaPredicted RBP10.83□□□□□ -0.68
SF3B6-201ENST00000233468 GUCA1CO95843 209 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 C2P06681 752 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 KLK3P07288 261 aaPredicted RBP10.83□□□□□ -0.68
SF3B6-201ENST00000233468 SLC35E2BP0CK96 405 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 COL6A2P12110 1019 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 PVRP15151 417 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 CD1DP15813 335 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 GRIA3P42263 894 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 TBPL1P62380 186 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 GUCA2AQ02747 115 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 CLN3Q13286 438 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 NAE1Q13564 534 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 BMPR2Q13873 1038 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 ACAP2Q15057 778 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 TSNQ15631 228 aaKnown RBP10.83□□□□□ -0.68
SF3B6-201ENST00000233468 GPR19Q15760 415 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 PHKG1Q16816 387 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 PPP1R3AQ16821 1122 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 TSNAXIP1Q2TAA8 658 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 MANEAQ5SRI9 462 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 YOD1Q5VVQ6 348 aaPredicted RBP10.83□□□□□ -0.68
SF3B6-201ENST00000233468 PRAMEF13Q5VWM6 474 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 SULT1C3Q6IMI6 304 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 INO80CQ6PI98 192 aaPredicted RBP10.83□□□□□ -0.68
SF3B6-201ENST00000233468 LCTLQ6UWM7 567 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 SBSNQ6UWP8 590 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 CDHR3Q6ZTQ4 885 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 ADCK2Q7Z695 626 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 CMC1Q7Z7K0 106 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 C17orf64Q86WR6 236 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 MCATQ8IVS2 390 aaKnown RBP10.83□□□□□ -0.68
SF3B6-201ENST00000233468 CACNA2D3Q8IZS8 1091 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 DNAJC22Q8N4W6 341 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 ZSCAN1Q8NBB4 408 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 SNRNP27Q8WVK2 155 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms