RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 MEN1O00255 615 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 ZSCAN9O15535 394 aaPredicted RBP12.15□□□□□ -0.46
LSM5-201ENST00000223084 ZNF500O60304 480 aaPredicted RBP12.15□□□□□ -0.46
LSM5-201ENST00000223084 CCNDBP1O95273 360 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 KLK3P07288 261 aaPredicted RBP12.15□□□□□ -0.46
LSM5-201ENST00000223084 VSX2P58304 361 aaPredicted RBP12.15□□□□□ -0.46
LSM5-201ENST00000223084 ILF2Q12905 390 aaKnown RBP12.15□□□□□ -0.46
LSM5-201ENST00000223084 DNASE1L3Q13609 305 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 CSHL1Q14406 222 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 ZKSCAN8Q15776 578 aaPredicted RBP12.15□□□□□ -0.46
LSM5-201ENST00000223084 PPP1R3AQ16821 1122 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 C18orf21Q32NC0 220 aaPredicted RBP12.15□□□□□ -0.46
LSM5-201ENST00000223084 ATP1A1-AS1Q5TC04 95 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 PRAMEF13Q5VWM6 474 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 ZNF425Q6IV72 752 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 ADCK2Q7Z695 626 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 PAQR7Q86WK9 346 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 PLD3Q8IV08 490 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 DSELQ8IZU8 1212 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 ZSCAN1Q8NBB4 408 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 SNRNP27Q8WVK2 155 aaKnown RBP12.15□□□□□ -0.46
LSM5-201ENST00000223084 PYCR2Q96C36 320 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 FBXL8Q96CD0 374 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 SLC45A3Q96JT2 553 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 PRAP1Q96NZ9 151 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 FUT8Q9BYC5 575 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 DERL2Q9GZP9 239 aa12.15□□□□□ -0.46
LSM5-201ENST00000223084 NOVA2Q9UNW9 492 aaKnown RBP12.15□□□□□ -0.46
LSM5-201ENST00000223084 LOC400499M0QZD8 3231 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 NCF1BA6NI72 391 aaPredicted RBP12.14□□□□□ -0.47
LSM5-201ENST00000223084 NCF1CA8MVU1 366 aaPredicted RBP12.14□□□□□ -0.47
LSM5-201ENST00000223084 HAT1O14929 419 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 EIF2S1P05198 315 aaKnown RBP12.14□□□□□ -0.47
LSM5-201ENST00000223084 ENO2P09104 434 aaPredicted RBP12.14□□□□□ -0.47
LSM5-201ENST00000223084 SLC35E2BP0CK96 405 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 MYBL2P10244 700 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 PRKAR1AP10644 381 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 NCF1P14598 390 aaPredicted RBP12.14□□□□□ -0.47
LSM5-201ENST00000223084 CD1DP15813 335 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 AP1S2P56377 157 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 RPS18P62269 152 aaKnown RBP12.14□□□□□ -0.47
LSM5-201ENST00000223084 ABATP80404 500 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 DLG1Q12959 904 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 OR4D1Q15615 310 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 WASHC2DQ5SRD0 308 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 FAM69BQ5VUD6 431 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 ZNF385CQ66K41 422 aaPredicted RBP12.14□□□□□ -0.47
LSM5-201ENST00000223084 CAPN13Q6MZZ7 669 aaPredicted RBP12.14□□□□□ -0.47
LSM5-201ENST00000223084 C16orf46Q6P387 395 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 TLDC1Q6P9B6 456 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 RAPH1Q70E73 1250 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 RNF44Q7L0R7 432 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 DTWD1Q8N5C7 304 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 OR56A3Q8NH54 315 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 STARD8Q92502 1023 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 ANKRD7Q92527 254 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 PTERQ96BW5 349 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 LRFN5Q96NI6 719 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 ZNF285Q96NJ3 590 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 OR4K3Q96R72 315 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 EGFL8Q99944 293 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 ZFYVE21Q9BQ24 234 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 SGPP1Q9BX95 441 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 ANKMY1Q9P2S6 941 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 SNX7Q9UNH6 387 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 OARD1Q9Y530 152 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 AP1M2Q9Y6Q5 423 aa12.14□□□□□ -0.47
LSM5-201ENST00000223084 ZNF891A8MT65 544 aaPredicted RBP12.13□□□□□ -0.47
LSM5-201ENST00000223084 ESPNB1AK53 854 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 POC1B-GALNT4F8VUJ3 575 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 H0YGG7 62 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 MED26O95402 600 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 STATHP02808 62 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 HBQ1P09105 142 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 CDH1P12830 882 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 NPPBP16860 134 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 ALAS2P22557 587 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 GCGRP47871 477 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 PMS2P54278 862 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 ARF3P61204 181 aaPredicted RBP12.13□□□□□ -0.47
LSM5-201ENST00000223084 NFKB2Q00653 900 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 IRF9Q00978 393 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 SLC9A5Q14940 896 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 NAA25Q14CX7 972 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 FBXO48Q5FWF7 155 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 RHBDD2Q6NTF9 364 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 FAM198BQ6UWH4 519 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 LCTLQ6UWM7 567 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 ZNF517Q6ZMY9 492 aaPredicted RBP12.13□□□□□ -0.47
LSM5-201ENST00000223084 TTLL10Q6ZVT0 673 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 FRA10AC1Q70Z53 315 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 ADAMTSL2Q86TH1 951 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 SLC44A1Q8WWI5 657 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 ATL1Q8WXF7 558 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 UBXN10Q96LJ8 280 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 GBP5Q96PP8 586 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 PAFAH2Q99487 392 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 NDC1Q9BTX1 674 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 EFHD1Q9BUP0 239 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 ACTL8Q9H568 366 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms