RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 APOLD1Q96LR9 279 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 PANX1Q96RD7 426 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 CLSTN3Q9BQT9 956 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 ASPSCR1Q9BZE9 553 aa12.92□□□□□ -0.34
SRP54-201ENST00000216774 PDP1Q9P0J1 537 aaPredicted RBP12.92□□□□□ -0.34
SRP54-201ENST00000216774 A0A1W2PQ45 241 aaPredicted RBP12.91□□□□□ -0.34
SRP54-201ENST00000216774 A0A1W2PQY0 241 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 TMEM221A6NGB7 291 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 SLC16A5O15375 505 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 NADKO95544 446 aaPredicted RBP12.91□□□□□ -0.34
SRP54-201ENST00000216774 MPC1LP0DKB6 136 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 BMP1P13497 986 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 FSHRP23945 695 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 HOXA9P31269 272 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 GKP32189 559 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 TM4SF4P48230 202 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 MASP1P48740 699 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 ITGA1P56199 1179 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 C21orf58P58505 322 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 CSNK2BP67870 215 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 B4GALNT1Q00973 533 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 PTCHD3Q3KNS1 767 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 FAHD1Q6P587 224 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 CRTC1Q6UUV9 634 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 TPRG1Q6ZUI0 275 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 CBLL1Q75N03 491 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 ZSWIM9Q86XI8 627 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 ZNF540Q8NDQ6 660 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 OR6Q1Q8NGQ2 317 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 ADAMTS19Q8TE59 1207 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 ZFP90Q8TF47 636 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 EGLN2Q96KS0 407 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 PITX2Q99697 317 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 SPATA9Q9BWV2 254 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 REXO4Q9GZR2 422 aaKnown RBP12.91□□□□□ -0.34
SRP54-201ENST00000216774 ARMC7Q9H6L4 198 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 EPS8L2Q9H6S3 715 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 ANKHQ9HCJ1 492 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 ACOT13Q9NPJ3 140 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 KRT84Q9NSB2 600 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 DNAJC11Q9NVH1 559 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 FAM120CQ9NX05 1096 aaKnown RBP12.91□□□□□ -0.34
SRP54-201ENST00000216774 KIF17Q9P2E2 1029 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 SAMHD1Q9Y3Z3 626 aaKnown RBP12.91□□□□□ -0.34
SRP54-201ENST00000216774 AP1M2Q9Y6Q5 423 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 KRBA1A5PL33 1030 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 MAGEB17A8MXT2 336 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 hCG_2039718K7EN88 272 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 SCAMP3O14828 347 aaKnown RBP12.91□□□□□ -0.34
SRP54-201ENST00000216774 ZNF821O75541 412 aaPredicted RBP12.91□□□□□ -0.34
SRP54-201ENST00000216774 MT-ND2P03891 347 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 ALDH7A1P49419 539 aaKnown RBP12.91□□□□□ -0.34
SRP54-201ENST00000216774 AP1S2P56377 157 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 RPS3AP61247 264 aaKnown RBP12.91□□□□□ -0.34
SRP54-201ENST00000216774 VLDLRP98155 873 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 IL1RL1Q01638 556 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 CSTF3Q12996 717 aaKnown RBP12.91□□□□□ -0.34
SRP54-201ENST00000216774 FADDQ13158 208 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 VEZF1Q14119 521 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 LAPTM4AQ15012 233 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 ZDHHC20Q5W0Z9 365 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 LAIR1Q6GTX8 287 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 KIAA1841Q6NSI8 718 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 CYP2U1Q7Z449 544 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 ADCK1Q86TW2 530 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 OR8J2Q8NGG1 315 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 ASIC4Q96FT7 647 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 SCRN2Q96FV2 425 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 HSH2DQ96JZ2 352 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 REEP1Q9H902 201 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 STARD7Q9NQZ5 370 aa12.91□□□□□ -0.34
SRP54-201ENST00000216774 A8MX80 341 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 E9PQ18 207 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 GFYI3L273 518 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 TOR1BO14657 336 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 MAN1A2O60476 641 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 UGDHO60701 494 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 SCN2BO60939 215 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 FAM20BO75063 409 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 FKBP9O95302 570 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 JUPP14923 745 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 EFNA1P20827 205 aaPredicted RBP12.9□□□□□ -0.34
SRP54-201ENST00000216774 PSMB9P28065 219 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 HIST2H2ACQ16777 129 aaPredicted RBP12.9□□□□□ -0.34
SRP54-201ENST00000216774 PLEKHG6Q3KR16 790 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 ATP13A5Q4VNC0 1218 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 LRRC66Q68CR7 880 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 USP45Q70EL2 814 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 TMEM150AQ86TG1 271 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 PTOV1Q86YD1 416 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 SYT12Q8IV01 421 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 OR2AP1Q8NGE2 309 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 STARD8Q92502 1023 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 PSD2Q9BQI7 771 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 VN1R3Q9BXE9 311 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 NMRK2Q9NPI5 230 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 ABCB8Q9NUT2 735 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 PPIL1Q9Y3C6 166 aa12.9□□□□□ -0.34
SRP54-201ENST00000216774 CLDN24A6NM45 220 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 ADAM23O75077 832 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms