RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 DOK6Q6PKX4 331 aa28.7■■■□□ 2.18
PABPN1-201ENST00000216727 TMPRSS11BQ86T26 416 aa28.7■■■□□ 2.18
PABPN1-201ENST00000216727 SYT12Q8IV01 421 aa28.7■■■□□ 2.18
PABPN1-201ENST00000216727 HUS1BQ8NHY5 278 aa28.7■■■□□ 2.18
PABPN1-201ENST00000216727 CENPNQ96H22 339 aaPredicted RBP28.7■■■□□ 2.18
PABPN1-201ENST00000216727 LGR4Q9BXB1 951 aa28.7■■■□□ 2.18
PABPN1-201ENST00000216727 IKZF5Q9H5V7 419 aa28.7■■■□□ 2.18
PABPN1-201ENST00000216727 GORASP2Q9H8Y8 452 aa28.7■■■□□ 2.18
PABPN1-201ENST00000216727 PDP2Q9P2J9 529 aa28.7■■■□□ 2.18
PABPN1-201ENST00000216727 PCDHB14Q9Y5E9 798 aa28.7■■■□□ 2.18
PABPN1-201ENST00000216727 A0A1W2PP55 124 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 GPR89AB7ZAQ6 455 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 GPR89BP0CG08 455 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 PRKCQQ04759 706 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 SRSF11Q05519 484 aaKnown RBP28.69■■■□□ 2.18
PABPN1-201ENST00000216727 PPP4R4Q6NUP7 873 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 UGT2A3Q6UWM9 527 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 MTSS1LQ765P7 747 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 ZNF548Q8NEK5 533 aaPredicted RBP28.69■■■□□ 2.18
PABPN1-201ENST00000216727 RAD51AP1Q96B01 352 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 CIB1Q99828 191 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 EBPLQ9BY08 206 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 PRKAB1Q9Y478 270 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 CROCCQ5TZA2 2017 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 MYO1DO94832 1006 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 SOX11P35716 441 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 KIR3DL1P43629 444 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 INTS11Q5TA45 600 aaKnown RBP28.69■■■□□ 2.18
PABPN1-201ENST00000216727 OR52E8Q6IFG1 317 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 TMEM132CQ8N3T6 1108 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 PACRGLQ8N7B6 248 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 SPDYE1Q8NFV5 336 aaPredicted RBP28.69■■■□□ 2.18
PABPN1-201ENST00000216727 OR10A6Q8NH74 314 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 SETD7Q8WTS6 366 aaKnown RBP28.69■■■□□ 2.18
PABPN1-201ENST00000216727 EZH1Q92800 747 aaPredicted RBP28.69■■■□□ 2.18
PABPN1-201ENST00000216727 SLC23A2Q9UGH3 650 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 ASF1AQ9Y294 204 aa28.69■■■□□ 2.18
PABPN1-201ENST00000216727 KLHL33A6NCF5 533 aa28.68■■■□□ 2.18
PABPN1-201ENST00000216727 ANXA6P08133 673 aa28.68■■■□□ 2.18
PABPN1-201ENST00000216727 C1GALT1C1LP0DN25 315 aa28.68■■■□□ 2.18
PABPN1-201ENST00000216727 PTPN6P29350 595 aa28.68■■■□□ 2.18
PABPN1-201ENST00000216727 TIE1P35590 1138 aa28.68■■■□□ 2.18
PABPN1-201ENST00000216727 TRIM23P36406 574 aa28.68■■■□□ 2.18
PABPN1-201ENST00000216727 PGS1Q32NB8 556 aa28.68■■■□□ 2.18
PABPN1-201ENST00000216727 PAGE2BQ5JRK9 111 aa28.68■■■□□ 2.18
PABPN1-201ENST00000216727 DNAJC14Q6Y2X3 702 aaPredicted RBP28.68■■■□□ 2.18
PABPN1-201ENST00000216727 ZBTB49Q6ZSB9 765 aa28.68■■■□□ 2.18
PABPN1-201ENST00000216727 SLC29A1Q99808 456 aa28.68■■■□□ 2.18
PABPN1-201ENST00000216727 GDF15Q99988 308 aa28.68■■■□□ 2.18
PABPN1-201ENST00000216727 KAT8Q9H7Z6 458 aaKnown RBP28.68■■■□□ 2.18
PABPN1-201ENST00000216727 CCDC177Q9NQR7 707 aaPredicted RBP28.68■■■□□ 2.18
PABPN1-201ENST00000216727 GMNNO75496 209 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 LRATO95237 230 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 ETHE1O95571 254 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 ZCCHC18P0CG32 403 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 KELP23276 732 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 CHN2P52757 468 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 POLE2P56282 527 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 MAP7Q14244 749 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 NRF1Q16656 503 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 SPIN4Q56A73 249 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 METRNLQ641Q3 311 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 DCUN1D3Q8IWE4 304 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 LAS2Q8IYD9 372 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 CHTF18Q8WVB6 975 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 STARD8Q92502 1023 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 CPPED1Q9BRF8 314 aaPredicted RBP28.67■■■□□ 2.18
PABPN1-201ENST00000216727 MBNL1Q9NR56 388 aaKnown RBP28.67■■■□□ 2.18
PABPN1-201ENST00000216727 SLC6A13Q9NSD5 602 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 C7orf72A4D263 438 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 FOXE1O00358 373 aaPredicted RBP28.67■■■□□ 2.18
PABPN1-201ENST00000216727 PI15O43692 258 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 PCNAP12004 261 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 CDH1P12830 882 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 CCT8P50990 548 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 DLX2Q07687 328 aaPredicted RBP28.67■■■□□ 2.18
PABPN1-201ENST00000216727 GTDC1Q4AE62 458 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 CATSPEREQ5SY80 951 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 OR52E4Q8NGH9 312 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 SLC5A11Q8WWX8 675 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 FAM131CQ96AQ9 280 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 GBP5Q96PP8 586 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 INVSQ9Y283 1065 aa28.67■■■□□ 2.18
PABPN1-201ENST00000216727 CKMT2P17540 419 aa28.66■■■□□ 2.18
PABPN1-201ENST00000216727 MTHFRP42898 656 aa28.66■■■□□ 2.18
PABPN1-201ENST00000216727 SEC13P55735 322 aa28.66■■■□□ 2.18
PABPN1-201ENST00000216727 UGT8Q16880 541 aa28.66■■■□□ 2.18
PABPN1-201ENST00000216727 ADNP2Q6IQ32 1131 aa28.66■■■□□ 2.18
PABPN1-201ENST00000216727 OR8J2Q8NGG1 315 aa28.66■■■□□ 2.18
PABPN1-201ENST00000216727 TFGQ92734 400 aaPredicted RBP28.66■■■□□ 2.18
PABPN1-201ENST00000216727 OSBPL11Q9BXB4 747 aa28.66■■■□□ 2.18
PABPN1-201ENST00000216727 WDR26Q9H7D7 661 aa28.66■■■□□ 2.18
PABPN1-201ENST00000216727 GEMIN8Q9NWZ8 242 aaKnown RBP28.66■■■□□ 2.18
PABPN1-201ENST00000216727 ZFR2Q9UPR6 939 aaKnown RBP28.66■■■□□ 2.18
PABPN1-201ENST00000216727 MAPRE3Q9UPY8 281 aa28.66■■■□□ 2.18
PABPN1-201ENST00000216727 SH2B3Q9UQQ2 575 aa28.66■■■□□ 2.18
PABPN1-201ENST00000216727 KMOO15229 486 aa28.65■■■□□ 2.18
PABPN1-201ENST00000216727 TPST1O60507 370 aa28.65■■■□□ 2.18
PABPN1-201ENST00000216727 ASMTP46597 345 aa28.65■■■□□ 2.18
PABPN1-201ENST00000216727 TRPC1P48995 793 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms