RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 NXPE1Q8N323 547 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 GRHL3Q8TE85 626 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 IL17FQ96PD4 163 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 COQ7Q99807 217 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 SIKE1Q9BRV8 207 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 RNF38Q9H0F5 515 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 TBX21Q9UL17 535 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 A0A0J9YYE9 177 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 IDH3BO43837 385 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 BCL10O95999 233 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 IFNGP01579 166 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 OGDHQ02218 1023 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 GALNT2Q10471 571 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 SLC30A6Q6NXT4 461 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 CSNK1A1LQ8N752 337 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 TRPV3Q8NET8 790 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 RACGAP1Q9H0H5 632 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 LRIT1Q9P2V4 623 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 PHF11Q9UIL8 331 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 PTRH2Q9Y3E5 179 aaKnown RBP13.37□□□□□ -0.27
SIX4-201ENST00000216513 CCNOP22674 350 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 LCP2Q13094 533 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 HNRNPA1L2Q32P51 320 aaKnown RBP13.37□□□□□ -0.27
SIX4-201ENST00000216513 AGTRAPQ6RW13 159 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 SDR16C5Q8N3Y7 309 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 PDP2Q9P2J9 529 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 IKZF2Q9UKS7 526 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 ELOA3DA6NLF2 546 aaPredicted RBP13.37□□□□□ -0.27
SIX4-201ENST00000216513 INMTO95050 263 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 FOXK1P85037 733 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 ACY1Q03154 408 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 ENPP2Q13822 863 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 ELOA3BQ3SY89 546 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 PDZK1Q5T2W1 519 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 PAOXQ6QHF9 649 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 TMEM139Q8IV31 216 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 DHRSXQ8N5I4 330 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 ELOA3Q8NG57 546 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 CEP76Q8TAP6 659 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 EPS8L2Q9H6S3 715 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 PRDM8Q9NQV8 689 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 A0A1B0GTW7 788 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 ACOT7O00154 380 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 TRIM24O15164 1050 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 GGT5P36269 586 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 KHKP50053 298 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 CLCN4P51793 760 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 KCTD8Q6ZWB6 473 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 RANBP3LQ86VV4 465 aaPredicted RBP13.36□□□□□ -0.27
SIX4-201ENST00000216513 KLF16Q9BXK1 252 aaPredicted RBP13.36□□□□□ -0.27
SIX4-201ENST00000216513 A0A1B0GVT2 93 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 TP53I11O14683 189 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 HDAC3O15379 428 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 FADS2O95864 444 aaKnown RBP13.36□□□□□ -0.27
SIX4-201ENST00000216513 HBQ1P09105 142 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 UROSP10746 265 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 CD247P20963 164 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 HOXD13P35453 343 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 GRK6P43250 576 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 C15orf39Q6ZRI6 1047 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 SHISA6Q6ZSJ9 500 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 TSPAN33Q86UF1 283 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 NLGN4YQ8NFZ3 816 aaPredicted RBP13.36□□□□□ -0.27
SIX4-201ENST00000216513 PHOSPHO1Q8TCT1 267 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 CHFRQ96EP1 664 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 SH3YL1Q96HL8 342 aaPredicted RBP13.36□□□□□ -0.27
SIX4-201ENST00000216513 PHF12Q96QT6 1004 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 NMUR2Q9GZQ4 415 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 Q9N2J8 555 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 TMEM189-UBE2V1I3L0A0 370 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 PMM2O15305 246 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 TMCC2O75069 709 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 JUNP05412 331 aaKnown RBP13.36□□□□□ -0.27
SIX4-201ENST00000216513 ANPEPP15144 967 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 GDF5P43026 501 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 EIF2B2P49770 351 aaKnown RBP13.36□□□□□ -0.27
SIX4-201ENST00000216513 INO80DQ53TQ3 878 aaPredicted RBP13.36□□□□□ -0.27
SIX4-201ENST00000216513 ZNF540Q8NDQ6 660 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 NAT6Q93015 286 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 SLC2A13Q96QE2 648 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 MVB12BQ9H7P6 319 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 SH3GLB1Q9Y371 365 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 PPP1R8Q12972 351 aaKnown RBP13.36□□□□□ -0.27
SIX4-201ENST00000216513 ARMC4Q5T2S8 1044 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 SLC47A1Q96FL8 570 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 ZNF717Q9BY31 904 aaPredicted RBP13.36□□□□□ -0.27
SIX4-201ENST00000216513 GPN2Q9H9Y4 310 aaPredicted RBP13.36□□□□□ -0.27
SIX4-201ENST00000216513 PLCL2Q9UPR0 1127 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 C15orf41Q9Y2V0 281 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 PKD1L3Q7Z443 1732 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 GRXCR2A6NFK2 248 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 COQ9O75208 318 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 CPNE6O95741 557 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 CTBP2P56545 445 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 PAFAH1B3Q15102 231 aaKnown RBP13.36□□□□□ -0.27
SIX4-201ENST00000216513 SMU1Q2TAY7 513 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 TMIGD1Q6UXZ0 262 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 ASPGQ86U10 573 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 RORBQ92753 470 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 HIST1H2AAQ96QV6 131 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms