RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 MTO1Q9Y2Z2 717 aaKnown RBP16.69■□□□□ 0.26
MRPL28-201ENST00000199706 PIAS1O75925 651 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 TCN2P20062 427 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 AGXTP21549 392 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 F8A1P23610 371 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 PTPN4P29074 926 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 RPS15P62841 145 aaKnown RBP16.68■□□□□ 0.26
MRPL28-201ENST00000199706 CDC20Q12834 499 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 CAPN13Q6MZZ7 669 aaPredicted RBP16.68■□□□□ 0.26
MRPL28-201ENST00000199706 FAM198BQ6UWH4 519 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 SYVN1Q86TM6 617 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 IFT81Q8WYA0 676 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 MR1Q95460 341 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 ACAT2Q9BWD1 397 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 SLC7A5P2Q9GIP4 190 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 TMEM184CQ9NVA4 438 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 KLHL20Q9Y2M5 609 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 OARD1Q9Y530 152 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 COL6A6A6NMZ7 2263 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 SPTA1P02549 2419 aa16.68■□□□□ 0.26
MRPL28-201ENST00000199706 CFAP46Q8IYW2 2715 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 KCNE1BA0A087WTH5 132 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 A0A1B0GX78 115 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 C9J4A7 227 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 TXNDC9O14530 226 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 CREG1O75629 220 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 CAPN1P07384 714 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 ABHD2P08910 425 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 SAT1P21673 171 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 CRABP2P29373 138 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 CSRP3P50461 194 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 ZNF460Q14592 562 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 NCF4Q15080 339 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 FAM214AQ32MH5 1076 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 THEMIS2Q5TEJ8 643 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 PRAMEF17Q5VTA0 474 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 SPNS2Q8IVW8 549 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 KLHDC8AQ8IYD2 350 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 ZNF655Q8N720 491 aaPredicted RBP16.67■□□□□ 0.26
MRPL28-201ENST00000199706 TTC29Q8NA56 475 aaPredicted RBP16.67■□□□□ 0.26
MRPL28-201ENST00000199706 PPFIBP2Q8ND30 876 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 ABHD11Q8NFV4 315 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 ANKRD49Q8WVL7 239 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 FKBP10Q96AY3 582 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 THAP11Q96EK4 314 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 SARGQ9BW04 601 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 SPRTNQ9H040 489 aaPredicted RBP16.67■□□□□ 0.26
MRPL28-201ENST00000199706 CHST8Q9H2A9 424 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 TXLNGQ9NUQ3 528 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 CTNNAL1Q9UBT7 734 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 PADI2Q9Y2J8 665 aa16.67■□□□□ 0.26
MRPL28-201ENST00000199706 SMG1Q96Q15 3661 aaKnown RBP16.67■□□□□ 0.26
MRPL28-201ENST00000199706 DSCR3O14972 297 aa16.66■□□□□ 0.26
MRPL28-201ENST00000199706 ZNF500O60304 480 aaPredicted RBP16.66■□□□□ 0.26
MRPL28-201ENST00000199706 ANXA5P08758 320 aa16.66■□□□□ 0.26
MRPL28-201ENST00000199706 PGGT1BP53609 377 aa16.66■□□□□ 0.26
MRPL28-201ENST00000199706 DCDP81605 110 aaKnown RBP16.66■□□□□ 0.26
MRPL28-201ENST00000199706 NAE1Q13564 534 aa16.66■□□□□ 0.26
MRPL28-201ENST00000199706 PRTGQ2VWP7 1150 aa16.66■□□□□ 0.26
MRPL28-201ENST00000199706 GARNL3Q5VVW2 1013 aa16.66■□□□□ 0.26
MRPL28-201ENST00000199706 FBXO42Q6P3S6 717 aa16.66■□□□□ 0.26
MRPL28-201ENST00000199706 MBOAT1Q6ZNC8 495 aa16.66■□□□□ 0.26
MRPL28-201ENST00000199706 C17orf64Q86WR6 236 aa16.66■□□□□ 0.26
MRPL28-201ENST00000199706 TCAIMQ8N3R3 496 aa16.66■□□□□ 0.26
MRPL28-201ENST00000199706 MVB12AQ96EY5 273 aa16.66■□□□□ 0.26
MRPL28-201ENST00000199706 OR2A5Q96R48 311 aa16.66■□□□□ 0.26
MRPL28-201ENST00000199706 ACTL8Q9H568 366 aa16.66■□□□□ 0.26
MRPL28-201ENST00000199706 AKIRIN1Q9H9L7 192 aaPredicted RBP16.66■□□□□ 0.26
MRPL28-201ENST00000199706 WDR70Q9NW82 654 aa16.66■□□□□ 0.26
MRPL28-201ENST00000199706 IKZF3Q9UKT9 509 aa16.66■□□□□ 0.26
MRPL28-201ENST00000199706 NPEPPSL1A6NEC2 478 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 CDC7O00311 574 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 IPO13O94829 963 aaKnown RBP16.65■□□□□ 0.26
MRPL28-201ENST00000199706 SLC35E2BP0CK96 405 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 CD1DP15813 335 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 NPPBP16860 134 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 RPS15AP62244 130 aaKnown RBP16.65■□□□□ 0.26
MRPL28-201ENST00000199706 YBX1P67809 324 aaKnown RBP16.65■□□□□ 0.26
MRPL28-201ENST00000199706 TSTA3Q13630 321 aaPredicted RBP16.65■□□□□ 0.26
MRPL28-201ENST00000199706 UGT8Q16880 541 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 ZXDCQ2QGD7 858 aaPredicted RBP16.65■□□□□ 0.26
MRPL28-201ENST00000199706 PRMT9Q6P2P2 845 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 BORAQ6PGQ7 559 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 PCSK4Q6UW60 755 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 TRMT10CQ7L0Y3 403 aaKnown RBP16.65■□□□□ 0.26
MRPL28-201ENST00000199706 SLC44A1Q8WWI5 657 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.65■□□□□ 0.26
MRPL28-201ENST00000199706 ISL2Q96A47 359 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 KIAA1191Q96A73 305 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 MED8Q96G25 268 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 SLC26A1Q9H2B4 701 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 WDR54Q9H977 334 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 CAB39LQ9H9S4 337 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 CUTCQ9NTM9 273 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 IRAK4Q9NWZ3 460 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 TUBD1Q9UJT1 453 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 ZNF180Q9UJW8 692 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 FARSAQ9Y285 508 aaKnown RBP16.65■□□□□ 0.26
MRPL28-201ENST00000199706 BOD1L1Q8NFC6 3051 aa16.65■□□□□ 0.26
MRPL28-201ENST00000199706 A0A0J9YVX5 310 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms