RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 HOXB6P17509 224 aaKnown RBP18.35■□□□□ 0.53
MBD3-201ENST00000156825 DSTNP60981 165 aa18.35■□□□□ 0.53
MBD3-201ENST00000156825 MPP2Q14168 576 aa18.35■□□□□ 0.53
MBD3-201ENST00000156825 MYBPC3Q14896 1274 aa18.35■□□□□ 0.53
MBD3-201ENST00000156825 CYP27C1Q4G0S4 372 aa18.35■□□□□ 0.53
MBD3-201ENST00000156825 SNTG1Q9NSN8 517 aa18.35■□□□□ 0.53
MBD3-201ENST00000156825 RIMKLBQ9ULI2 386 aa18.35■□□□□ 0.53
MBD3-201ENST00000156825 K7ERQ8 282 aa18.35■□□□□ 0.53
MBD3-201ENST00000156825 RFPL2O75678 378 aa18.35■□□□□ 0.53
MBD3-201ENST00000156825 C7orf57Q8NEG2 295 aa18.35■□□□□ 0.53
MBD3-201ENST00000156825 SLCO3A1Q9UIG8 710 aa18.35■□□□□ 0.53
MBD3-201ENST00000156825 LCHNA4D1U4 455 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 PGRP06401 933 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 MERTKQ12866 999 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 ZNF311Q5JNZ3 666 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 SWT1Q5T5J6 900 aaKnown RBP18.34■□□□□ 0.53
MBD3-201ENST00000156825 TMIGD1Q6UXZ0 262 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 TICAM1Q8IUC6 712 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 FIZ1Q96SL8 496 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 C8orf4Q9NR00 106 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 LTBP3Q9NS15 1303 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 H3BSH0 61 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 CHRNA1P02708 482 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 GLDCP23378 1020 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 DLG1Q12959 904 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 RTP2Q5QGT7 225 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 MLIPQ5VWP3 458 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 MEIOBQ8N635 442 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 OR5M3Q8NGP4 307 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 OR5K1Q8NHB7 308 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 TMEM203Q969S6 136 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 TMBIM1Q969X1 311 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 GFM1Q96RP9 751 aaKnown RBP18.34■□□□□ 0.53
MBD3-201ENST00000156825 CHST10O43529 356 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 GPR32O75388 356 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 OC90Q02509 493 aaPredicted RBP18.34■□□□□ 0.53
MBD3-201ENST00000156825 NDUFA5Q16718 116 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 CDHR3Q6ZTQ4 885 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 SMPDL3AQ92484 453 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 IRF7Q92985 503 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 TRIM63Q969Q1 353 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 KIAA1191Q96A73 305 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 ASB9Q96DX5 294 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 GTPBP2Q9BX10 602 aaKnown RBP18.34■□□□□ 0.53
MBD3-201ENST00000156825 WDR12Q9GZL7 423 aaKnown RBP18.34■□□□□ 0.53
MBD3-201ENST00000156825 TLL2Q9Y6L7 1015 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 KNDC1Q76NI1 1749 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 RHOP08100 348 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 BLMHQ13867 455 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 POLR2J2Q9GZM3 115 aaKnown RBP18.34■□□□□ 0.53
MBD3-201ENST00000156825 DIABLOQ9NR28 239 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 RBMX2Q9Y388 322 aaKnown RBP18.34■□□□□ 0.53
MBD3-201ENST00000156825 CITO14578 2027 aa18.34■□□□□ 0.53
MBD3-201ENST00000156825 IRGMA1A4Y4 181 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 IFNA6P05013 189 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 HOXA11P31270 313 aaPredicted RBP18.33■□□□□ 0.53
MBD3-201ENST00000156825 ARFIP1P53367 373 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 RBBP4Q09028 425 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 EPGNQ6UW88 154 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 ZC3H3Q8IXZ2 948 aaKnown RBP18.33■□□□□ 0.53
MBD3-201ENST00000156825 TRPV3Q8NET8 790 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 JPH3Q8WXH2 748 aaPredicted RBP18.33■□□□□ 0.53
MBD3-201ENST00000156825 AURKBQ96GD4 344 aaPredicted RBP18.33■□□□□ 0.53
MBD3-201ENST00000156825 PHF12Q96QT6 1004 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 ZNF860A6NHJ4 632 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 KCNA5P22460 613 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 CCKBRP32239 447 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 TMEM115Q12893 351 aaPredicted RBP18.33■□□□□ 0.53
MBD3-201ENST00000156825 C5orf22Q49AR2 442 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 CEACAM20Q6UY09 585 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 NFKBIDQ8NI38 313 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 ZFP3Q96NJ6 502 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 PKP2Q99959 881 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 SEZ6LQ9BYH1 1024 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 RBCK1Q9BYM8 510 aa18.33■□□□□ 0.53
MBD3-201ENST00000156825 RBMXL2O75526 392 aaKnown RBP18.33■□□□□ 0.52
MBD3-201ENST00000156825 DLDP09622 509 aaKnown RBP18.33■□□□□ 0.52
MBD3-201ENST00000156825 DAG1Q14118 895 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 SEMA3AQ14563 771 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 LRRC70Q7Z2Q7 622 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 TTC9BQ8N6N2 239 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 C2CD4AQ8NCU7 369 aaPredicted RBP18.33■□□□□ 0.52
MBD3-201ENST00000156825 SLC22A18Q96BI1 424 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 SPATA7Q9P0W8 599 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 TRBC2A0A5B9 178 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 H7BY64 318 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 FANCGO15287 622 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 RFPL1O75677 317 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 MAGEA11P43364 429 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 DNASE1L1P49184 302 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 ABATP80404 500 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 LMAN2Q12907 356 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 ZNF776Q68DI1 518 aaPredicted RBP18.33■□□□□ 0.52
MBD3-201ENST00000156825 CHERPQ8IWX8 916 aaKnown RBP18.33■□□□□ 0.52
MBD3-201ENST00000156825 SLC22A15Q8IZD6 547 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 PMM1Q92871 262 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 RFKQ969G6 155 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 PRAP1Q96NZ9 151 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 RAB11FIP5Q9BXF6 653 aa18.33■□□□□ 0.52
MBD3-201ENST00000156825 DERL2Q9GZP9 239 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms