RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 PIAS3Q9Y6X2 628 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 CACNA1IQ9P0X4 2223 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 HNRNPCL2B2RXH8 293 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 SOCS2O14508 198 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 GPIP06744 558 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 MMP2P08253 660 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 TFPTP0C1Z6 253 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 ARNTP27540 789 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 PPP2R1BP30154 601 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 MAGEA3P43357 314 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 CLDN2P57739 230 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 CDKL1Q00532 357 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 MEP1AQ16819 746 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 USP39Q53GS9 565 aaKnown RBP11.72□□□□□ -0.53
CHPF2-201ENST00000035307 PIGGQ5H8A4 983 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 LETMD1Q6P1Q0 360 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 THAP5Q7Z6K1 395 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 PATL1Q86TB9 770 aaKnown RBP11.72□□□□□ -0.53
CHPF2-201ENST00000035307 GATAD2AQ86YP4 633 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 PHYKPLQ8IUZ5 450 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 DOK4Q8TEW6 326 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 NUS1Q96E22 293 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 TRMT2BQ96GJ1 504 aaKnown RBP11.72□□□□□ -0.53
CHPF2-201ENST00000035307 CARS2Q9HA77 564 aaKnown RBP11.72□□□□□ -0.53
CHPF2-201ENST00000035307 IL17CQ9P0M4 197 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 RBBP6Q7Z6E9 1792 aaKnown RBP11.72□□□□□ -0.53
CHPF2-201ENST00000035307 CENPAP49450 140 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 ACBD5Q5T8D3 534 aaPredicted RBP11.72□□□□□ -0.53
CHPF2-201ENST00000035307 CAPN13Q6MZZ7 669 aaPredicted RBP11.72□□□□□ -0.53
CHPF2-201ENST00000035307 CASP12Q6UXS9 341 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 PARGQ86W56 976 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 PROSER1Q86XN7 944 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 LSMEM2Q8N112 164 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 CLIP4Q8N3C7 705 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 TRPV3Q8NET8 790 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 ATL1Q8WXF7 558 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 ZNF689Q96CS4 500 aaPredicted RBP11.72□□□□□ -0.53
CHPF2-201ENST00000035307 TEX12Q9BXU0 123 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 AHSPQ9NZD4 102 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 RHCGQ9UBD6 479 aa11.72□□□□□ -0.53
CHPF2-201ENST00000035307 SUCOQ9UBS9 1254 aaKnown RBP11.72□□□□□ -0.53
CHPF2-201ENST00000035307 TRPM7Q96QT4 1865 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 XPNPEP2O43895 674 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 RB1P06400 928 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 HNRNPA1P09651 372 aaKnown RBP eCLIP11.71□□□□□ -0.53
CHPF2-201ENST00000035307 OXTRP30559 389 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 CTSKP43235 329 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 OR1E2P47887 323 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 CCNYL2Q5T2Q4 361 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 GALNT15Q8N3T1 639 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 SETD9Q8NE22 299 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 C7orf57Q8NEG2 295 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 ART5Q96L15 291 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 P2RY13Q9BPV8 354 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 IFT80Q9P2H3 777 aaPredicted RBP11.71□□□□□ -0.53
CHPF2-201ENST00000035307 CLIC1O00299 241 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 B4GAT1O43505 415 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 SLC28A2O43868 658 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 GNAO1P09471 354 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 ZDHHC11BP0C7U3 371 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 GJA4P35212 333 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 HMGCLP35914 325 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 CAPGP40121 348 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 NAA20P61599 178 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 DLX2Q07687 328 aaPredicted RBP11.71□□□□□ -0.53
CHPF2-201ENST00000035307 GRSF1Q12849 480 aaKnown RBP eCLIP11.71□□□□□ -0.53
CHPF2-201ENST00000035307 TMEM115Q12893 351 aaPredicted RBP11.71□□□□□ -0.53
CHPF2-201ENST00000035307 IHHQ14623 411 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 DUS1LQ6P1R4 473 aaKnown RBP11.71□□□□□ -0.53
CHPF2-201ENST00000035307 OR2A12Q8NGT7 310 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 MUS81Q96NY9 551 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 SLC7A5P2Q9GIP4 190 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 KLHL20Q9Y2M5 609 aa11.71□□□□□ -0.53
CHPF2-201ENST00000035307 TDRD15B5MCY1 1934 aaKnown RBP11.71□□□□□ -0.53
CHPF2-201ENST00000035307 GLOD5A6NK44 160 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 MAGEB17A8MXT2 336 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 EPOP01588 193 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 CPOXP36551 454 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 IL12RB1P42701 662 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 SLC7A9P82251 487 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 HERC3Q15034 1050 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 KBTBD6Q86V97 674 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 TERB1Q8NA31 727 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 LKAAEAR1Q8TD35 194 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 FGF14Q92915 247 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 TP53INP1Q96A56 240 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 C12orf66Q96MD2 445 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 CCDC3Q9BQI4 270 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 RPS6KA6Q9UK32 745 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 NINQ8N4C6 2090 aa11.71□□□□□ -0.54
CHPF2-201ENST00000035307 PAPSS2O95340 614 aaPredicted RBP11.7□□□□□ -0.54
CHPF2-201ENST00000035307 ENGP17813 658 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 MAOBP27338 520 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 ACTR1BP42025 376 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 ACTR1AP61163 376 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 RFX4Q33E94 735 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 ZNF805Q5CZA5 627 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 PARS2Q7L3T8 475 aaKnown RBP11.7□□□□□ -0.54
CHPF2-201ENST00000035307 PAGE2Q7Z2X7 111 aa11.7□□□□□ -0.54
CHPF2-201ENST00000035307 C17orf64Q86WR6 236 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms