RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Appl1Q8K3H0 707 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Slc38a4Q8R1S9 547 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Igsf8Q8R366 611 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Olfr448Q8VES9 310 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Olfr1263Q8VG63 306 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Man2c1Q91W89 1039 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Arrb2Q91YI4 410 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Mto1Q923Z3 669 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Trim33Q99PP7 1142 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Ndufb5Q9CQH3 189 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Fabp12Q9DAK4 132 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 GabarapQ9DCD6 117 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Fhl5Q9WTX7 284 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 RgrQ9Z2B3 291 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Gm6592A2AHC7 168 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Slc43a3A2AVZ9 502 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Btbd35f28A2CFD5 498 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Btbd35f30J3QML3 498 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Sh3yl1O08641 340 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Dhcr7O88455 471 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Csf2rb2P26954 878 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 CskP41241 450 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 GlrbP48168 496 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Entpd1P55772 510 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 CidecP56198 239 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 SmoP56726 793 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Kcnh6Q32ME0 950 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Ulk3Q3U3Q1 472 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Arhgef15Q5FWH6 849 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Fam169aQ5XG69 665 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Olfr1015Q7TR94 312 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Slc6a15Q8BG16 729 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 TxlngQ8BHN1 524 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Eme1Q8BJW7 570 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Znf410Q8BKX7 478 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Ckap4Q8BMK4 575 aaKnown RBP9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Bend7Q8BSV3 434 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 BpifcQ8C186 509 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Ccdc17Q8CE13 565 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Dock3Q8CIQ7 2027 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Brd8Q8R3B7 951 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Utp6Q8VCY6 597 aaKnown RBP9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Olfr677Q8VF06 312 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 SelenomQ8VHC3 145 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Elp2Q91WG4 831 aaKnown RBP9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Pcdhb19Q91Y01 801 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 ArhgdiaQ99PT1 204 aaKnown RBP9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Uqcc2Q9CQY6 136 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Map2k5Q9WVS7 448 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Wdr81Q5ND34 1934 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Gm21885A0A286YDN8 145 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Fam43bA2AM80 330 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Tmem236A2ARJ3 344 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 H2-AaP01910 256 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 H2-D1P14427 368 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Ccr7P47774 378 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Slc26a1P58735 704 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 MagixQ4KL35 324 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Olig3Q6PFG8 273 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Defb14Q7TNV9 67 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Trim17Q7TPM3 477 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Adgrd1Q80T32 903 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Ugt2b35Q8BJL9 529 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Wdr47Q8CGF6 920 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Ifnl3Q8CGK6 193 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Zbtb20Q8K0L9 741 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 GabrpQ8QZW7 440 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Olfr807Q8VGI9 311 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Olfr1353Q8VGU8 309 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Kiaa2013Q91X21 634 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 HnrnpllQ921F4 591 aaKnown RBP9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Mlf2Q99KX1 247 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Q99LU8 229 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 L3hypdhQ9CXA2 354 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Capn10Q9ESK3 666 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 GabrqQ9JLF1 638 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Trip4Q9QXN3 581 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Enpp2Q9R1E6 862 aa9.53□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Ccdc163A2AGD7 326 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Gm13089A2AGW7 455 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Arhgap40E9Q6X9 672 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Gm5724L7N264 670 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Vti1bO88384 232 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Fcgr2P08101 330 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Pax3P24610 479 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Sept4P28661 478 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Bpifa6Q0VGU8 367 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Fut7Q11131 389 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Ermp1Q3UVK0 898 aaKnown RBP9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Q3UY34 256 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Egfl8Q6GUQ1 293 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Ints6Q6PCM2 883 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Olfr1355Q7TQU9 310 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Znf473Q8BI67 892 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Elmo1Q8BPU7 727 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Tmem125Q8CHQ6 216 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Ntmt1Q8R2U4 223 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Q9D937 123 aaKnown RBP9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 GatmQ9D964 423 aaKnown RBP9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Ern1Q9EQY0 977 aa9.52□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms