RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 FZD6O60353 706 aa14.19□□□□□ -0.14
SCARB2-221ENST00000640341 VIPP01282 170 aa14.19□□□□□ -0.14
SCARB2-221ENST00000640341 UGT2B4P06133 528 aa14.19□□□□□ -0.14
SCARB2-221ENST00000640341 SEPHS1P49903 392 aa14.19□□□□□ -0.14
SCARB2-221ENST00000640341 ABRQ12979 859 aa14.19□□□□□ -0.14
SCARB2-221ENST00000640341 VEPH1Q14D04 833 aa14.19□□□□□ -0.14
SCARB2-221ENST00000640341 ZXDCQ2QGD7 858 aaPredicted RBP14.19□□□□□ -0.14
SCARB2-221ENST00000640341 C5orf22Q49AR2 442 aa14.19□□□□□ -0.14
SCARB2-221ENST00000640341 NEK5Q6P3R8 708 aa14.19□□□□□ -0.14
SCARB2-221ENST00000640341 TRAF7Q6Q0C0 670 aa14.19□□□□□ -0.14
SCARB2-221ENST00000640341 CHST9Q7L1S5 443 aa14.19□□□□□ -0.14
SCARB2-221ENST00000640341 DNAJB7Q7Z6W7 309 aaPredicted RBP14.19□□□□□ -0.14
SCARB2-221ENST00000640341 SCAMP4Q969E2 229 aa14.19□□□□□ -0.14
SCARB2-221ENST00000640341 ABCB10Q9NRK6 738 aa14.19□□□□□ -0.14
SCARB2-221ENST00000640341 SH3BP4Q9P0V3 963 aa14.19□□□□□ -0.14
SCARB2-221ENST00000640341 SNX6Q9UNH7 406 aa14.19□□□□□ -0.14
SCARB2-221ENST00000640341 POU2F1P14859 743 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 CD97P48960 835 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 CLK3P49761 638 aaKnown RBP14.18□□□□□ -0.14
SCARB2-221ENST00000640341 ATN1P54259 1190 aaPredicted RBP14.18□□□□□ -0.14
SCARB2-221ENST00000640341 IRF8Q02556 426 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 FAM26DQ5JW98 314 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 PSD4Q8NDX1 1056 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 SH3KBP1Q96B97 665 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 HSH2DQ96JZ2 352 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 KCNC2Q96PR1 638 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 C6orf62Q9GZU0 229 aaPredicted RBP14.18□□□□□ -0.14
SCARB2-221ENST00000640341 KCNH6Q9H252 994 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 RAPGEFL1Q9UHV5 662 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 YIPF1Q9Y548 306 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 TRIM17Q9Y577 477 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 LOC100506127A0A0U1RQW1 187 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 KRBA1A5PL33 1030 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 KDM1AO60341 852 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 PQBP1O60828 265 aaKnown RBP14.18□□□□□ -0.14
SCARB2-221ENST00000640341 ADAM23O75077 832 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 EPN2O95208 641 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 HSMCR30P0CW71 290 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 EPORP19235 508 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 CD70P32970 193 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 MRPL19P49406 292 aaKnown RBP14.18□□□□□ -0.14
SCARB2-221ENST00000640341 ELAVL2Q12926 359 aaKnown RBP14.18□□□□□ -0.14
SCARB2-221ENST00000640341 DGKKQ5KSL6 1271 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 TRIM46Q7Z4K8 759 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 P3H2Q8IVL5 708 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 HTRA1Q92743 480 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 ZNF641Q96N77 438 aaPredicted RBP14.18□□□□□ -0.14
SCARB2-221ENST00000640341 ZNF347Q96SE7 839 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 ASPSCR1Q9BZE9 553 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 ATP13A3Q9H7F0 1226 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 THG1LQ9NWX6 298 aaKnown RBP14.18□□□□□ -0.14
SCARB2-221ENST00000640341 HECAQ9UBI9 543 aaPredicted RBP14.18□□□□□ -0.14
SCARB2-221ENST00000640341 TPRKBQ9Y3C4 175 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 TESMINQ9Y4I5 508 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 FABP3P05413 133 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 RETP07949 1114 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 PBLDP30039 288 aaPredicted RBP14.18□□□□□ -0.14
SCARB2-221ENST00000640341 ST13P50502 369 aaKnown RBP14.18□□□□□ -0.14
SCARB2-221ENST00000640341 CLDN8P56748 225 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 ZNF846Q147U1 533 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 TCTN1Q2MV58 587 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 ATG9BQ674R7 924 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 FAM180BQ6P0A1 224 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 CHPT1Q8WUD6 406 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 HPS1Q92902 700 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 P2RY13Q9BPV8 354 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 NEURL2Q9BR09 285 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 TTLL2Q9BWV7 592 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 SAMD4AQ9UPU9 718 aaKnown RBP14.18□□□□□ -0.14
SCARB2-221ENST00000640341 PCDHGA10Q9Y5H3 936 aa14.18□□□□□ -0.14
SCARB2-221ENST00000640341 GRXCR2A6NFK2 248 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 KPNA4O00629 521 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-221ENST00000640341 UGT2B11O75310 529 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 SULT1C4O75897 302 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 IGHA2P01877 340 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 OR1E2P47887 323 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 TMED10P49755 219 aaKnown RBP14.17□□□□□ -0.14
SCARB2-221ENST00000640341 CLCA4Q14CN2 919 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 INO80DQ53TQ3 878 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-221ENST00000640341 XKR6Q5GH73 641 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 NOXRED1Q6NXP6 359 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 RBM12BQ8IXT5 1001 aaKnown RBP14.17□□□□□ -0.14
SCARB2-221ENST00000640341 PJA1Q8NG27 643 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 RDH12Q96NR8 316 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 CLSTN3Q9BQT9 956 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 NTMT1Q9BV86 223 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 KLF16Q9BXK1 252 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-221ENST00000640341 REEP1Q9H902 201 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 KCTD5Q9NXV2 234 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 TRPS1Q9UHF7 1281 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 A0A096LPI6 279 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 A0A1W2PQ45 241 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-221ENST00000640341 A0A1W2PQY0 241 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 INPPL1O15357 1258 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 PCMT1P22061 227 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 SERPINA4P29622 427 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 C21orf33P30042 268 aaPredicted RBP14.17□□□□□ -0.14
SCARB2-221ENST00000640341 NSG1P42857 185 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 MASP1P48740 699 aa14.17□□□□□ -0.14
SCARB2-221ENST00000640341 AP1S1P61966 158 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms