RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 UBE2R2Q712K3 238 aaPredicted RBP16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 PSMA8Q8TAA3 256 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 REXO5Q96IC2 774 aaKnown RBP16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 MIR1-1HGQ9H1L0 117 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 RMND5AQ9H871 391 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 THG1LQ9NWX6 298 aaKnown RBP16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 SCN3BQ9NY72 215 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 CD84Q9UIB8 345 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 CLEC4EQ9ULY5 219 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 TRBC1P01850 177 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 NTRK1P04629 796 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 GALTP07902 379 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 NUDT7P0C024 238 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 HMGA1P17096 107 aaKnown RBP16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 GPR153Q6NV75 609 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 CHST9Q7L1S5 443 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 CCDC71Q8IV32 467 aaPredicted RBP16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 VRK3Q8IV63 474 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 TTLL2Q9BWV7 592 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 LRFN2Q9ULH4 789 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 NAALAD2Q9Y3Q0 740 aa16.08■□□□□ 0.16
HNRNPU-228ENST00000640306 NPIPB15A6NHN6 443 aaPredicted RBP16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 EVPLLA8MZ36 301 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 CLIC1O00299 241 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 PRAMEF4O60810 478 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 VIPP01282 170 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 CCR7P32248 378 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 KRT20P35900 424 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 TMED10P49755 219 aaKnown RBP16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 CREMQ03060 361 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 KCNC4Q03721 635 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 ABHD18Q0P651 414 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 SLC13A2Q13183 592 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 PRAMEF9Q5VWM5 478 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 NEK5Q6P3R8 708 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 TPGS1Q6ZTW0 290 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 PLPP6Q8IY26 295 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 TET1Q8NFU7 2136 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 MAL2Q969L2 176 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 PLD4Q96BZ4 506 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 MTERF1Q99551 399 aaKnown RBP16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 MROQ9BYG7 248 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 MAGIXQ9H6Y5 334 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 KRT84Q9NSB2 600 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 B3GNT3Q9Y2A9 372 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 TPRKBQ9Y3C4 175 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 FPGTO14772 594 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 KDM1AO60341 852 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 UGT2B4P06133 528 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 TNFRSF1BP20333 461 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 HOXA9P31269 272 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 RAB15P59190 212 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 INAVAQ3KP66 663 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 LRIF1Q5T3J3 769 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 UTS2BQ765I0 119 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 BEND7Q8N7W2 519 aaPredicted RBP16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 ASIC4Q96FT7 647 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 HSH2DQ96JZ2 352 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 SLC32A1Q9H598 525 aa16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 DNMT3BQ9UBC3 853 aaKnown RBP16.07■□□□□ 0.16
HNRNPU-228ENST00000640306 RGS10O43665 173 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 CD36P16671 472 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 MAGEA8P43361 318 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 KIR3DL1P43629 444 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 ST13P50502 369 aaKnown RBP16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 DGUOKQ16854 277 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 RFX4Q33E94 735 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 ATP13A5Q4VNC0 1218 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 PLD3Q8IV08 490 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 NXPE1Q8N323 547 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 MFSD4AQ8N468 514 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 SETD9Q8NE22 299 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 HEPHQ9BQS7 1158 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 ASPSCR1Q9BZE9 553 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 WDR12Q9GZL7 423 aaKnown RBP16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 IL1RAPQ9NPH3 570 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 ABCB10Q9NRK6 738 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 SAMD4AQ9UPU9 718 aaKnown RBP16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 SLC22A1O15245 554 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 CCNDBP1O95273 360 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 FABP3P05413 133 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 C21orf33P30042 268 aaPredicted RBP16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 SEPHS1P49903 392 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 MVKQ03426 396 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 KIAA1841Q6NSI8 718 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 SLC22A16Q86VW1 577 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 SYT12Q8IV01 421 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 ARL14EPQ8N8R7 260 aaPredicted RBP16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 HTRA1Q92743 480 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 ABHD8Q96I13 439 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 KCNC2Q96PR1 638 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 CDK5RAP1Q96SZ6 601 aaKnown RBP16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 ZBTB20Q9HC78 741 aaPredicted RBP16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 ACOT13Q9NPJ3 140 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 ZNF229Q9UJW7 825 aa16.06■□□□□ 0.16
HNRNPU-228ENST00000640306 A8MU76 341 aa16.05■□□□□ 0.16
HNRNPU-228ENST00000640306 WNT9AO14904 365 aa16.05■□□□□ 0.16
HNRNPU-228ENST00000640306 PCDHGA12O60330 932 aa16.05■□□□□ 0.16
HNRNPU-228ENST00000640306 ITGAMP11215 1152 aa16.05■□□□□ 0.16
HNRNPU-228ENST00000640306 RPS3P23396 243 aaKnown RBP eCLIP16.05■□□□□ 0.164e-14■□□□□ 10.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms