RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 FAM171BQ6P995 826 aa14.05□□□□□ -0.16
SCARB2-216ENST00000639300 ZNF514Q96K75 400 aaPredicted RBP14.05□□□□□ -0.16
SCARB2-216ENST00000639300 TRMT61BQ9BVS5 477 aaKnown RBP14.05□□□□□ -0.16
SCARB2-216ENST00000639300 POLR2J3Q9H1A7 115 aaKnown RBP14.05□□□□□ -0.16
SCARB2-216ENST00000639300 TOR3AQ9H497 397 aa14.05□□□□□ -0.16
SCARB2-216ENST00000639300 ITM2CQ9NQX7 267 aa14.05□□□□□ -0.16
SCARB2-216ENST00000639300 CLEC4AQ9UMR7 237 aa14.05□□□□□ -0.16
SCARB2-216ENST00000639300 ABHD14A-ACY1A0A1B0GW23 586 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 HTR6P50406 440 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 ARSFP54793 590 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 LMAN2Q12907 356 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 TARDBPQ13148 414 aaKnown RBP eCLIP14.04□□□□□ -0.16
SCARB2-216ENST00000639300 C17orf99Q6UX52 265 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 ARHGAP12Q8IWW6 846 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 HDDC3Q8N4P3 179 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 POMGNT2Q8NAT1 580 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 TFGQ92734 400 aaPredicted RBP14.04□□□□□ -0.16
SCARB2-216ENST00000639300 NUS1Q96E22 293 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 SMIM14Q96QK8 99 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 TTLL2Q9BWV7 592 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 SLC29A3Q9BZD2 475 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 TAC3Q9UHF0 121 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 FYNP06241 537 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 CD36P16671 472 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 PCDH1Q08174 1060 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 SCARB2Q14108 478 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 ZNF648Q5T619 568 aaPredicted RBP14.04□□□□□ -0.16
SCARB2-216ENST00000639300 ZNF544Q6NX49 715 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 COMMD2Q86X83 199 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 PEX13Q92968 403 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 PTERQ96BW5 349 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 ZBED6CLQ96FA7 236 aaPredicted RBP14.04□□□□□ -0.16
SCARB2-216ENST00000639300 MEAF6Q9HAF1 191 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 POPDC3Q9HBV1 291 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 IL36AQ9UHA7 158 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 CHURC1-FNTBB4DL54 471 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 GTPBP1O00178 669 aaKnown RBP14.04□□□□□ -0.16
SCARB2-216ENST00000639300 PDPK1O15530 556 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 HIST1H2ABP04908 130 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 RPS13P62277 151 aaKnown RBP14.04□□□□□ -0.16
SCARB2-216ENST00000639300 C18orf21Q32NC0 220 aaPredicted RBP14.04□□□□□ -0.16
SCARB2-216ENST00000639300 SNAP47Q5SQN1 464 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 PRAMEF14Q5SWL7 426 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 PRAMEF13Q5VWM6 474 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 CNKSR3Q6P9H4 555 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 FAM131AQ6UXB0 335 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 HIST3H2AQ7L7L0 130 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 ADGRG6Q86SQ4 1221 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 ERI1Q8IV48 349 aaKnown RBP14.04□□□□□ -0.16
SCARB2-216ENST00000639300 DNAJB8Q8NHS0 232 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 SORCS1Q8WY21 1168 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 HIST1H2ACQ93077 130 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 DPEP2Q9H4A9 486 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 MARCH7Q9H992 704 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 MAGEE1Q9HCI5 957 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 ADAP2Q9NPF8 381 aa14.04□□□□□ -0.16
SCARB2-216ENST00000639300 PRSS51A0A1B0GVH4 220 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 CPSF4LA6NMK7 179 aaKnown RBP14.03□□□□□ -0.16
SCARB2-216ENST00000639300 DNAJA1P31689 397 aaKnown RBP14.03□□□□□ -0.16
SCARB2-216ENST00000639300 VIPR1P32241 457 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 PNLIPRP1P54315 467 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 OR4D2P58180 307 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 ERVK-21P61565 698 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 ABRAXAS2Q15018 415 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 TAB1Q15750 504 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 ZUFSPQ96AP4 578 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 CCM2Q9BSQ5 444 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 BOCQ9BWV1 1114 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 CMTM6Q9NX76 183 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 M0QZQ0 153 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 PLK4O00444 970 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 TBX1O43435 398 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 CCNDBP1O95273 360 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 FDXRP22570 491 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 ITPKBP27987 946 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 TAS2R50P59544 299 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 DMPKQ09013 629 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 TAZQ16635 292 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 ZNF423Q2M1K9 1284 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 POMZP3Q6PJE2 187 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 TICAM1Q8IUC6 712 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 COX4I2Q96KJ9 171 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 SLITRK2Q9H156 845 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 FBXL21Q9UKT6 434 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 TMEM98Q9Y2Y6 226 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 LOC100130705A0A1B0GUX0 176 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 CCDC182A6NF36 153 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 SCN2BO60939 215 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 JUNP05412 331 aaKnown RBP14.03□□□□□ -0.16
SCARB2-216ENST00000639300 ANXA8P13928 327 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 ETV3P41162 512 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 ALDH3A2P51648 485 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 PPIGQ13427 754 aaKnown RBP eCLIP14.03□□□□□ -0.16
SCARB2-216ENST00000639300 COL9A2Q14055 689 aaPredicted RBP14.03□□□□□ -0.16
SCARB2-216ENST00000639300 DUOXA1Q1HG43 343 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 PDCD4Q53EL6 469 aaKnown RBP14.03□□□□□ -0.16
SCARB2-216ENST00000639300 PIGGQ5H8A4 983 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 CLLU1OSQ5K130 101 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 MZT2BQ6NZ67 158 aa14.03□□□□□ -0.16
SCARB2-216ENST00000639300 MZT2AQ6P582 158 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms