RNA–Protein interactions for RNA: ENST00000638664.1

SPIN3-210, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,793 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-210ENST00000638664 GKN1Q9NS71 199 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 THUMPD1Q9NXG2 353 aaKnown RBP13.4□□□□□ -0.26
SPIN3-210ENST00000638664 QPCTLQ9NXS2 382 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 PCDHB1Q9Y5F3 818 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 HSPE1-MOB4S4R3N1 261 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.4□□□□□ -0.26
SPIN3-210ENST00000638664 CLDN24A6NM45 220 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 CD160O95971 181 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 COL6A1P12109 1028 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 ZNF7P17097 686 aaPredicted RBP13.4□□□□□ -0.26
SPIN3-210ENST00000638664 HOXB9P17482 250 aaPredicted RBP13.4□□□□□ -0.26
SPIN3-210ENST00000638664 ENGP17813 658 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 ALOX12P18054 663 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 SDC1P18827 310 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 EPORP19235 508 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 AQP1P29972 269 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 PPP3CCP48454 512 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 NUDT6P53370 316 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 ZXDBP98169 803 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 CDC20Q12834 499 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 FADDQ13158 208 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 ZNF177Q13360 481 aaPredicted RBP13.4□□□□□ -0.26
SPIN3-210ENST00000638664 CLLU1OSQ5K130 101 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 GLB1LQ6UWU2 654 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 RSPO2Q6UXX9 243 aaPredicted RBP13.4□□□□□ -0.26
SPIN3-210ENST00000638664 HEATR4Q86WZ0 1026 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 ADGRG2Q8IZP9 1017 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 CARNMT1Q8N4J0 409 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 TRPV1Q8NER1 839 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 CDC26Q8NHZ8 85 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 EFHD2Q96C19 240 aaPredicted RBP13.4□□□□□ -0.26
SPIN3-210ENST00000638664 SP140LQ9H930 580 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 CCNB1IP1Q9NPC3 277 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 TRPS1Q9UHF7 1281 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 RNF6Q9Y252 685 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 MAN2B2Q9Y2E5 1009 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 AP3M1Q9Y2T2 418 aa13.4□□□□□ -0.26
SPIN3-210ENST00000638664 FCF1Q9Y324 198 aaKnown RBP13.4□□□□□ -0.26
SPIN3-210ENST00000638664 TRPM7Q96QT4 1865 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 CLIC1O00299 241 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 STK16O75716 305 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 CLDN9O95484 217 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 KLKB1P03952 638 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 IRF1P10914 325 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 DGKAP23743 735 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 SLC19A1P41440 591 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 HNRNPFP52597 415 aaKnown RBP13.39□□□□□ -0.27
SPIN3-210ENST00000638664 CYP4F2P78329 520 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 MTA1Q13330 715 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 CAMK2GQ13555 558 aaPredicted RBP13.39□□□□□ -0.27
SPIN3-210ENST00000638664 PROX2Q3B8N5 592 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 RNF19BQ6ZMZ0 732 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 ZNF621Q6ZSS3 439 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 RAVER1Q8IY67 606 aaKnown RBP13.39□□□□□ -0.27
SPIN3-210ENST00000638664 ZBTB2Q8N680 514 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 PAF1Q8N7H5 531 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 NTMT1Q9BV86 223 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 TM6SF2Q9BZW4 377 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 REEP1Q9H902 201 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 MARCH7Q9H992 704 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 RMI1Q9H9A7 625 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 ERVW-1Q9UQF0 538 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 PLXNA4Q9HCM2 1894 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 EVPLLA8MZ36 301 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 GAPDHSO14556 408 aaPredicted RBP13.39□□□□□ -0.27
SPIN3-210ENST00000638664 DSCR3O14972 297 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 NUAK1O60285 661 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 WDR47O94967 919 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 KCNK5O95279 499 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 CPSF4O95639 269 aaKnown RBP13.39□□□□□ -0.27
SPIN3-210ENST00000638664 KRT6AP02538 564 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 KRT6BP04259 564 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 KDELR2P33947 212 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 KRT6CP48668 564 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 CRISP3P54108 245 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 IFITM2Q01629 132 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 FOXD4Q12950 439 aaPredicted RBP13.39□□□□□ -0.27
SPIN3-210ENST00000638664 TIGD6Q17RP2 521 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 VMACQ2NL98 169 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 TPRG1LQ5T0D9 272 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 LACC1Q8IV20 430 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 P3H2Q8IVL5 708 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 BEND7Q8N7W2 519 aaPredicted RBP13.39□□□□□ -0.27
SPIN3-210ENST00000638664 TXNDC15Q96J42 360 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 PANX1Q96RD7 426 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 HOXD1Q9GZZ0 328 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 MMP27Q9H306 513 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 ASIC5Q9NY37 505 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 KLHL3Q9UH77 587 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 Q9Y3F1 56 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 PCDHGA6Q9Y5G7 932 aa13.39□□□□□ -0.27
SPIN3-210ENST00000638664 ASNA1O43681 348 aa13.38□□□□□ -0.27
SPIN3-210ENST00000638664 SSX4O60224 188 aa13.38□□□□□ -0.27
SPIN3-210ENST00000638664 VNN2O95498 520 aa13.38□□□□□ -0.27
SPIN3-210ENST00000638664 NTRK1P04629 796 aa13.38□□□□□ -0.27
SPIN3-210ENST00000638664 GKP32189 559 aa13.38□□□□□ -0.27
SPIN3-210ENST00000638664 MAGEA11P43364 429 aa13.38□□□□□ -0.27
SPIN3-210ENST00000638664 SLC11A2P49281 568 aa13.38□□□□□ -0.27
SPIN3-210ENST00000638664 SF1Q15637 639 aaKnown RBP13.38□□□□□ -0.27
SPIN3-210ENST00000638664 UBE2UQ5VVX9 321 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms