RNA–Protein interactions for RNA: ENST00000637966.1

CACNA1A-255, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,887 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-255	ENST00000637966	GPR42	O15529	346 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	UGDH	O60701	494 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	ATP6AP2	O75787	350 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	KRT36	O76013	467 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	SORBS2	O94875	1100 aa	Known RBP	11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	CSF2	P04141	144 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	NDUFS1	P28331	727 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	CSNK1E	P49674	416 aa	Known RBP	11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	IRF8	Q02556	426 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	GGTA1P	Q4G0N0	100 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	LIPJ	Q5W064	366 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	IYD	Q6PHW0	289 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	RIPOR1	Q6ZS17	1223 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	NET1	Q7Z628	596 aa	Predicted RBP	11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	TAF8	Q7Z7C8	310 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	RAB42	Q8N4Z0	105 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	RP9	Q8TA86	221 aa	Known RBP	11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	SLC29A3	Q9BZD2	475 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	AKTIP	Q9H8T0	292 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	TAAR2	Q9P1P5	351 aa		11.93	□□□□□ -0.5
CACNA1A-255	ENST00000637966	TDRD6	O60522	2096 aa	Known RBP	11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	KCNE1B	A0A087WTH5	132 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966		E7EQ34	232 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	MANBA	O00462	879 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	VILL	O15195	856 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	VPS4B	O75351	444 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	ULK1	O75385	1050 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	ALDOC	P09972	364 aa	Known RBP	11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	THRA	P10827	490 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	JUP	P14923	745 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	NME1	P15531	152 aa	Known RBP	11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	SLC19A1	P41440	591 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	CASP2	P42575	452 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	HTR6	P50406	440 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	ACTR3	P61158	418 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	C1orf61	Q13536	156 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	DOC2A	Q14183	400 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	ABRAXAS2	Q15018	415 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	CPSF6	Q16630	551 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	PRRT3	Q5FWE3	981 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	XKR7	Q5GH72	579 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	XKR6	Q5GH73	641 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	WLS	Q5T9L3	541 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	THEMIS2	Q5TEJ8	643 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	IL27RA	Q6UWB1	636 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	LCTL	Q6UWM7	567 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	SLCO4C1	Q6ZQN7	724 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	GK5	Q6ZS86	529 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	C11orf74	Q86VG3	221 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	DEFB107A	Q8IZN7	70 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	DTWD2	Q8NBA8	298 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	OR52E1	Q8NGJ3	308 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	GAB3	Q8WWW8	586 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	SMPDL3A	Q92484	453 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	NEIL2	Q969S2	332 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	RCN3	Q96D15	328 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	CXorf40B	Q96DE9	158 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	KIR3DX1	Q9H7L2	352 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	APOBEC3B	Q9UH17	382 aa	Known RBP	11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	DYRK1B	Q9Y463	629 aa		11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNA1A-255	ENST00000637966		H0Y3Z8	333 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	UBD	O15205	165 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	KDM1A	O60341	852 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	PDE5A	O76074	875 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	PSMG1	O95456	288 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	KRT6A	P02538	564 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	KRT6B	P04259	564 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	CELA2B	P08218	269 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	XRCC1	P18887	633 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	KRT6C	P48668	564 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	RAB28	P51157	221 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	AFF3	P51826	1226 aa	Known RBP	11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	NXPH1	P58417	271 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	SRSF5	Q13243	272 aa	Known RBP	11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	CYLC2	Q14093	348 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	E2F2	Q14209	437 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	SQLE	Q14534	574 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	ZRSR2	Q15696	482 aa	Known RBP	11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	TRMT5	Q32P41	509 aa	Known RBP	11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	SGO1	Q5FBB7	561 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	PRAMEF14	Q5SWL7	426 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	PRAMEF13	Q5VWM6	474 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	RNF165	Q6ZSG1	346 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966		Q6ZSR9	355 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	LINC01555	Q8NAE3	123 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	OR2L8	Q8NGY9	312 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	SH3KBP1	Q96B97	665 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	TUBGCP3	Q96CW5	907 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	HAUS8	Q9BT25	410 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	RAB11FIP5	Q9BXF6	653 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	PCBD2	Q9H0N5	130 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	XKR8	Q9H6D3	395 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	DCLRE1B	Q9H816	532 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	GIMAP2	Q9UG22	337 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	SNX6	Q9UNH7	406 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	OR5K4	A6NMS3	321 aa		11.91	□□□□□ -0.5
CACNA1A-255	ENST00000637966	CD22	P20273	847 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms