RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 FAM25EA8MYX2 175 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 ATXN7O15265 892 aaPredicted RBP3.88□□□□□ -1.79
SCN1A-214ENST00000637038 PRMT3O60678 531 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 CREG1O75629 220 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 STK16O75716 305 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 CLDN9O95484 217 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 PEX11BO96011 259 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 CHRNA1P02708 482 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 CXCL10P02778 98 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 MT-ND1P03886 318 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 MMP2P08253 660 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 CYP2A7P20853 494 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 FPR1P21462 350 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 DNAJA1P31689 397 aaKnown RBP3.88□□□□□ -1.79
SCN1A-214ENST00000637038 ACVRL1P37023 503 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 BMXP51813 675 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 NEK2P51955 445 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 SRSF11Q05519 484 aaKnown RBP3.88□□□□□ -1.79
SCN1A-214ENST00000637038 ELP6Q0PNE2 266 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 KEAP1Q14145 624 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 PLEKHG6Q3KR16 790 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 FAM174BQ3ZCQ3 159 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 GPR33Q49SQ1 333 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 HECTD3Q5T447 861 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 ANKS3Q6ZW76 656 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 LRRC70Q7Z2Q7 622 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 RIMKLAQ8IXN7 391 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 LIX1Q8N485 282 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 C3orf58Q8NDZ4 430 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 OR4F6Q8NGB9 312 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 OR9Q1Q8NGQ5 310 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 SELENOMQ8WWX9 145 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 ZHX1-C8orf76Q96EF9 292 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 MYO19Q96H55 970 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 PYURFQ96I23 114 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 REXO5Q96IC2 774 aaKnown RBP3.88□□□□□ -1.79
SCN1A-214ENST00000637038 PKMYT1Q99640 499 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 TBCDQ9BTW9 1192 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 TUBB1Q9H4B7 451 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 EHD1Q9H4M9 534 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 NOL6Q9H6R4 1146 aaKnown RBP3.88□□□□□ -1.79
SCN1A-214ENST00000637038 KRT84Q9NSB2 600 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 MTRRQ9UBK8 725 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 ZNF490Q9ULM2 529 aaPredicted RBP3.88□□□□□ -1.79
SCN1A-214ENST00000637038 YBX2Q9Y2T7 364 aaKnown RBP3.88□□□□□ -1.79
SCN1A-214ENST00000637038 TSC22D4Q9Y3Q8 395 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 OARD1Q9Y530 152 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 PTGDR2Q9Y5Y4 395 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 CUL9Q8IWT3 2517 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 A0A1B0GTW7 788 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 LRRC14BA6NHZ5 514 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 TBKBP1A7MCY6 615 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 SLC1A7O00341 560 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 RFXANKO14593 260 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 NIPSNAP2O75323 286 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 PRKD3O94806 890 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 CLIC3O95833 236 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 FABP3P05413 133 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 PGRP06401 933 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 OR56A5P0C7T3 313 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 MSL3P1P0C860 447 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 HRH2P25021 359 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 ELK4P28324 431 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 YAP1P46937 504 aaKnown RBP3.88□□□□□ -1.79
SCN1A-214ENST00000637038 KCNC1P48547 511 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 AGTR2P50052 363 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 MAPK10P53779 464 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 PLA2G16P53816 162 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 RPS14P62263 151 aaKnown RBP3.88□□□□□ -1.79
SCN1A-214ENST00000637038 ZNF33BQ06732 778 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 KCNAB2Q13303 367 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 PGS1Q32NB8 556 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 EML3Q32P44 896 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 FBXO43Q4G163 708 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 FAM171A1Q5VUB5 890 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 ANKRD54Q6NXT1 300 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 SHQ1Q6PI26 577 aaKnown RBP3.88□□□□□ -1.79
SCN1A-214ENST00000637038 NCCRP1Q6ZVX7 275 aaPredicted RBP3.88□□□□□ -1.79
SCN1A-214ENST00000637038 SLC24A5Q71RS6 500 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 SNX20Q7Z614 316 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 LRRTM3Q86VH5 581 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 ZDHHC21Q8IVQ6 265 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 SPARTQ8N0X7 666 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 HJURPQ8NCD3 748 aaPredicted RBP3.88□□□□□ -1.79
SCN1A-214ENST00000637038 ZNF540Q8NDQ6 660 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 CHDHQ8NE62 594 aaPredicted RBP3.88□□□□□ -1.79
SCN1A-214ENST00000637038 ABHD11Q8NFV4 315 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 PJA1Q8NG27 643 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 PROKR1Q8TCW9 393 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 CD200R1Q8TD46 325 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 SH3RF2Q8TEC5 729 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 UBTD2Q8WUN7 234 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 EEF1AKMT1Q8WVE0 214 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 IGSF8Q969P0 613 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 VOPP1Q96AW1 172 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 NXPE2Q96DL1 559 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 C19orf43Q9BQ61 176 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 ZDHHC5Q9C0B5 715 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 LHPPQ9H008 270 aa3.88□□□□□ -1.79
SCN1A-214ENST00000637038 TRIT1Q9H3H1 467 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms