RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 MAZP56270 477 aaKnown RBP6.5□□□□□ -1.37
UPF3B-205ENST00000636792 DNAJB13P59910 316 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 IRF9Q00978 393 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 IL9RQ01113 521 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 RELAQ04206 551 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 ZNF33BQ06732 778 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 GALNT1Q10472 559 aaPredicted RBP6.5□□□□□ -1.37
UPF3B-205ENST00000636792 DLG1Q12959 904 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 E2F2Q14209 437 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 GRB7Q14451 532 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 PCBP2Q15366 365 aaKnown RBP eCLIP6.5□□□□□ -1.37
UPF3B-205ENST00000636792 CCDC6Q16204 474 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 PHKG1Q16816 387 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.5□□□□□ -1.37
UPF3B-205ENST00000636792 CAPN13Q6MZZ7 669 aaPredicted RBP6.5□□□□□ -1.37
UPF3B-205ENST00000636792 LCTLQ6UWM7 567 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 ZYG11AQ6WRX3 759 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 C20orf204Q6ZNR8 217 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 SPRED1Q7Z699 444 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 GATAD2AQ86YP4 633 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 PLXDC1Q8IUK5 500 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 TRIM42Q8IWZ5 723 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 FBXO39Q8N4B4 442 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 PLPP7Q8NBV4 271 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 OR52E1Q8NGJ3 308 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 OR56A3Q8NH54 315 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 NAT14Q8WUY8 206 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 LCN9Q8WX39 176 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 PTERQ96BW5 349 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 FAM136AQ96C01 138 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 RHBDF1Q96CC6 855 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 L3HYPDHQ96EM0 354 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 ZDHHC12Q96GR4 267 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 SEC16BQ96JE7 1060 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 EGFL8Q99944 293 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 RTKNQ9BST9 563 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 MENTQ9BUN1 341 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 SGPP1Q9BX95 441 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 CENPHQ9H3R5 247 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 SRMSQ9H3Y6 488 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 SMOC1Q9H4F8 434 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 EHD1Q9H4M9 534 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 ALG9Q9H6U8 611 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 INTS7Q9NVH2 962 aaKnown RBP6.5□□□□□ -1.37
UPF3B-205ENST00000636792 ZNF446Q9NWS9 450 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 KCNK4Q9NYG8 393 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 NKIRAS1Q9NYS0 192 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 SEMA5BQ9P283 1151 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 STOX2Q9P2F5 926 aaPredicted RBP6.5□□□□□ -1.37
UPF3B-205ENST00000636792 COPG2Q9UBF2 871 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 FAM8A1Q9UBU6 413 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 PTBP2Q9UKA9 531 aaKnown RBP6.5□□□□□ -1.37
UPF3B-205ENST00000636792 RUVBL2Q9Y230 463 aaKnown RBP6.5□□□□□ -1.37
UPF3B-205ENST00000636792 APOBEC2Q9Y235 224 aaKnown RBP6.5□□□□□ -1.37
UPF3B-205ENST00000636792 PLEKHM1Q9Y4G2 1056 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 U3KQA8 63 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 PCNX2A6NKB5 2137 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 RP1P56715 2156 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 IGHV1OR21-1A0A087WYE8 117 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 OR5K3A6NET4 321 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 TLCD2A6NGC4 264 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 C4orf47A7E2U8 309 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 A8MT66 165 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 SUPT3HB4E1H0 165 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 E7ENX8 843 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 K7EPI3 171 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 CDC7O00311 574 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 NTN3O00634 580 aaPredicted RBP6.49□□□□□ -1.37
UPF3B-205ENST00000636792 PPM1DO15297 605 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 SUPT3HO75486 399 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 STK16O75716 305 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 UBXN7O94888 489 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 DKK1O94907 266 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 CPNE6O95741 557 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 MLYCDO95822 493 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 PROS1P07225 676 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 RPS17P08708 135 aaKnown RBP6.49□□□□□ -1.37
UPF3B-205ENST00000636792 F7P08709 466 aaPredicted RBP6.49□□□□□ -1.37
UPF3B-205ENST00000636792 DHRS4L1P0CG22 281 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 MYL2P10916 166 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 GFAPP14136 432 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 AMD1P17707 334 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 OAS2P29728 719 aaKnown RBP6.49□□□□□ -1.37
UPF3B-205ENST00000636792 SERPINB1P30740 379 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 PLA2G5P39877 138 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 ETV4P43268 484 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 BDKRB1P46663 353 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 SLC6A12P48065 614 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 MAGOHP61326 146 aaKnown RBP6.49□□□□□ -1.37
UPF3B-205ENST00000636792 TBPL1P62380 186 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 HERVK_113P63132 956 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 TAP2Q03519 686 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 ABRQ12979 859 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 PPM1JQ5JR12 505 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 PRAMEF14Q5SWL7 426 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 N4BP2L1Q5TBK1 243 aaPredicted RBP6.49□□□□□ -1.37
UPF3B-205ENST00000636792 LIPMQ5VYY2 423 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 ARMC6Q6NXE6 501 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 AGTRAPQ6RW13 159 aa6.49□□□□□ -1.37
UPF3B-205ENST00000636792 PRSS42Q7Z5A4 293 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms