RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ROGDIQ9GZN7 287 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 ZNF334Q9HCZ1 680 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 C8orf4Q9NR00 106 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 THG1LQ9NWX6 298 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 RAPGEFL1Q9UHV5 662 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 SLCO3A1Q9UIG8 710 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 ERGIC3Q9Y282 383 aa13.64□□□□□ -0.23
CACNA1A-228ENST00000636610 A0A096LPI6 279 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 DYTNA2CJ06 578 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 PABPN1LA6NDY0 278 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 NRG2O14511 850 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 CBFA2T3O75081 653 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 HIST1H2AGP0C0S8 130 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 HIST1H2ADP20671 130 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 C21orf33P30042 268 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 HPCAL1P37235 193 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 SEPHS1P49903 392 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 INAQ16352 499 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 SPATS1Q496A3 300 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 ZNF366Q8N895 744 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 KLHL23Q8NBE8 558 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 PIK3C3Q8NEB9 887 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 PSMA8Q8TAA3 256 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 MUL1Q969V5 352 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 HIST1H2AHQ96KK5 128 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 COPS8Q99627 209 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 HIST1H2AJQ99878 128 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 H2AFJQ9BTM1 129 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 RNF167Q9H6Y7 350 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 INIPQ9NRY2 104 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 HECAQ9UBI9 543 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 INTS6Q9UL03 887 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 TESMINQ9Y4I5 508 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 CHD7Q9P2D1 2997 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 EVPLLA8MZ36 301 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 EBLN1P0CF75 366 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 LAMP1P11279 417 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 PCMT1P22061 227 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 LHCGRP22888 699 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 PAX3P23760 479 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 SPAM1P38567 509 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 KIR3DL1P43629 444 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 MAD2L1Q13257 205 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 GBX1Q14549 363 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 CCSMST1Q4G0I0 132 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 OR2T5Q6IEZ7 315 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 OR2T29Q8NH02 315 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 PROX1Q92786 737 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 PLD4Q96BZ4 506 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 PDLIM5Q96HC4 596 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 HSH2DQ96JZ2 352 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 SH3GL1Q99961 368 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 NEURL2Q9BR09 285 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 TMEM9Q9P0T7 183 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 SH3BP4Q9P0V3 963 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 ENPP5Q9UJA9 477 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 GBF1Q92538 1859 aa13.63□□□□□ -0.23
CACNA1A-228ENST00000636610 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 INPPL1O15357 1258 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 CD6P30203 668 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 IDH2P48735 452 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 CREMQ03060 361 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 LMAN2Q12907 356 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 SLC13A2Q13183 592 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 UAP1L1Q3KQV9 507 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 IER5LQ5T953 404 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 HTRA1Q92743 480 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 CCDC115Q96NT0 180 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 TTLL2Q9BWV7 592 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 SLC32A1Q9H598 525 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 ABCB8Q9NUT2 735 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 CFAP97Q9P2B7 532 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 PCDHGA10Q9Y5H3 936 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 LOC100506127A0A0U1RQW1 187 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 CLDN25C9JDP6 229 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 CA12O43570 354 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 RECQL5O94762 991 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 PREPP48147 710 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 CATSPEREQ5SY80 951 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 RETSATQ6NUM9 610 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 NOXRED1Q6NXP6 359 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 CHST9Q7L1S5 443 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 TRIM46Q7Z4K8 759 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 CHPFQ8IZ52 775 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 SVOPLQ8N434 492 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 TERB1Q8NA31 727 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 SPPL2AQ8TCT8 520 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 C2orf49Q9BVC5 232 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 ABCB10Q9NRK6 738 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 KRT84Q9NSB2 600 aa13.62□□□□□ -0.23
CACNA1A-228ENST00000636610 KRBA1A5PL33 1030 aa13.61□□□□□ -0.23
CACNA1A-228ENST00000636610 HSMCR30P0CW71 290 aa13.61□□□□□ -0.23
CACNA1A-228ENST00000636610 SELPP16109 830 aa13.61□□□□□ -0.23
CACNA1A-228ENST00000636610 JUNBP17275 347 aaPredicted RBP13.61□□□□□ -0.23
CACNA1A-228ENST00000636610 ARHGDIAP52565 204 aa13.61□□□□□ -0.23
CACNA1A-228ENST00000636610 IRF8Q02556 426 aa13.61□□□□□ -0.23
CACNA1A-228ENST00000636610 HKDC1Q2TB90 917 aa13.61□□□□□ -0.23
CACNA1A-228ENST00000636610 XKR6Q5GH73 641 aa13.61□□□□□ -0.23
CACNA1A-228ENST00000636610 C2orf73Q8N5S3 287 aaPredicted RBP13.61□□□□□ -0.23
CACNA1A-228ENST00000636610 TRUB1Q8WWH5 349 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms