RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	CLDN4	O14493	209 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MUSK	O15146	869 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	GPR39	O43194	453 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TNFAIP8	O95379	198 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	KLK1	P06870	262 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	JUND	P17535	347 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CTH	P32929	405 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MTTP	P55157	894 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	PDK3	Q15120	406 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ZNF805	Q5CZA5	627 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ZFAND2B	Q8WV99	257 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	NCSTN	Q92542	709 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	DPYSL5	Q9BPU6	564 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SPATA5L1	Q9BVQ7	753 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SSU72	Q9NP77	194 aa	Known RBP	13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	IKZF3	Q9UKT9	509 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	RNF11	Q9Y3C5	154 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	IGLON5	A6NGN9	336 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	GLOD5	A6NK44	160 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	PEX12	O00623	359 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TNFRSF10B	O14763	440 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	GNB5	O14775	395 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	NOVA1	P51513	510 aa	Known RBP	13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	PTS	Q03393	145 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TTC23	Q5W5X9	447 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TMEM214	Q6NUQ4	689 aa	Known RBP	13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	GIPC3	Q8TF64	312 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SLC13A3	Q8WWT9	602 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	PHF12	Q96QT6	1004 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SEMA3G	Q9NS98	782 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TOR4A	Q9NXH8	423 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997		H7BY64	318 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TAS2R41	P59536	307 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MRPS21	P82921	87 aa	Known RBP	13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	KIAA0319	Q5VV43	1072 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	BROX	Q5VW32	411 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	FRG2	Q64ET8	278 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	PM20D1	Q6GTS8	502 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	FAM47B	Q8NA70	645 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	OR2T3	Q8NH03	318 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ZNF563	Q8TA94	476 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MSANTD3	Q96H12	275 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	PRAP1	Q96NZ9	151 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	FRG2B	Q96QU4	278 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SLC22A12	Q96S37	553 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TDRD1	Q9BXT4	1180 aa	Known RBP	13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	VPS29	Q9UBQ0	182 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	LRRC42	Q9Y546	428 aa		13.95	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CUL9	Q8IWT3	2517 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MYL12B	O14950	172 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	RFPL1	O75677	317 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TCEA3	O75764	348 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SDHB	P21912	280 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TNFRSF4	P43489	277 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CDKN1C	P49918	316 aa	Predicted RBP	13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ZNF33A	Q06730	810 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MAPK11	Q15759	364 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TRNP1	Q6NT89	227 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MYADM	Q96S97	322 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	RUVBL1	Q9Y265	456 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	AP3M1	Q9Y2T2	418 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TRIM24	O15164	1050 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	RRP8	O43159	456 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	PRMT3	O60678	531 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	OR6B1	O95007	311 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MTHFD1	P11586	935 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ITGB8	P26012	769 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	RGS8	P57771	180 aa	Predicted RBP	13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	MGAT3	Q09327	533 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ZNF155	Q12901	538 aa	Predicted RBP	13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	KBTBD2	Q8IY47	623 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SLC47A1	Q96FL8	570 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	FETUB	Q9UGM5	382 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	RBMX2	Q9Y388	322 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	AP4B1	Q9Y6B7	739 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	EVPL	Q92817	2033 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997		A0A1B0GUL6	1792 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ZNF860	A6NHJ4	632 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TNFRSF10A	O00220	468 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CCNDBP1	O95273	360 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ZNF30	P17039	623 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CHN2	P52757	468 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ADAM15	Q13444	863 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	CST6	Q15828	149 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	XKR4	Q5GH76	650 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	OR4F3	Q6IEY1	312 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SATL1	Q86VE3	508 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	C11orf65	Q8NCR3	313 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ZNF540	Q8NDQ6	660 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	DGCR14	Q96DF8	476 aa	Known RBP	13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	DUSP26	Q9BV47	211 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	ITM2C	Q9NQX7	267 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	TESMIN	Q9Y4I5	508 aa		13.94	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SMIM31	A0A1B0GVY4	71 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	DNAJA2	O60884	412 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	SLC25A12	O75746	678 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	OPN1SW	P03999	348 aa		13.93	□□□□□ -0.18
NEDD4L-238	ENST00000635997	C8orf89	P0DMQ9	161 aa		13.93	□□□□□ -0.18

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