RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 RGS4P49798 205 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 JAK3P52333 1124 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 YWHAGP61981 247 aaKnown RBP eCLIP4.71□□□□□ -1.65
SDCBP-213ENST00000630925 ECT2LQ008S8 904 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 DLG2Q15700 870 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 USP41Q3LFD5 358 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 ZNF569Q5MCW4 686 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 RABGAP1LQ5R372 815 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 KRT40Q6A162 431 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 TMEM220Q6QAJ8 160 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 IL20RBQ6UXL0 311 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 TMEM26Q6ZUK4 368 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 PAGE2Q7Z2X7 111 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.71□□□□□ -1.65
SDCBP-213ENST00000630925 PIGWQ7Z7B1 504 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 SLC51BQ86UW2 128 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 AQP12AQ8IXF9 295 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 PQLC1Q8N2U9 271 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 SVOPQ8N4V2 548 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 AMER3Q8N944 861 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 BEND2Q8NDZ0 799 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 CNOT9Q92600 299 aaKnown RBP4.71□□□□□ -1.65
SDCBP-213ENST00000630925 LPPQ93052 612 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 SLCO4A1Q96BD0 722 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 ZFYVE19Q96K21 471 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 MESP1Q9BRJ9 268 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 UBAC1Q9BSL1 405 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 FICDQ9BVA6 458 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 MRPL13Q9BYD1 178 aaKnown RBP4.71□□□□□ -1.65
SDCBP-213ENST00000630925 TRIM4Q9C037 500 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 OPN3Q9H1Y3 402 aaPredicted RBP4.71□□□□□ -1.65
SDCBP-213ENST00000630925 PLEKHA4Q9H4M7 779 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 ASB8Q9H765 288 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 CALHM2Q9HA72 323 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.71□□□□□ -1.65
SDCBP-213ENST00000630925 DLGAP2Q9P1A6 1054 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 FTSJ1Q9UET6 329 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 PISDQ9UG56 409 aa4.71□□□□□ -1.65
SDCBP-213ENST00000630925 PAIP2BQ9ULR5 123 aaKnown RBP4.71□□□□□ -1.65
SDCBP-213ENST00000630925 ANGEL1Q9UNK9 670 aaKnown RBP4.71□□□□□ -1.65
SDCBP-213ENST00000630925 CCDC162PA2VCL2 907 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 FAM181BA6NEQ2 426 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 MBD3L5A6NJ08 208 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-213ENST00000630925 PRR19A6NJB7 356 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 GRXCR1A8MXD5 290 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 ANKRD66B4E2M5 251 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 FOXE1O00358 373 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-213ENST00000630925 FOXN1O15353 648 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 EIF3HO15372 352 aaKnown RBP eCLIP4.71□□□□□ -1.66
SDCBP-213ENST00000630925 ADAM12O43184 909 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 BUD23O43709 281 aaKnown RBP4.71□□□□□ -1.66
SDCBP-213ENST00000630925 NRP2O60462 931 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 HCN1O60741 890 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 NDUFS3O75489 264 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 ICAM1P05362 532 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 GNAI3P08754 354 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 PNMA6AP0CW24 399 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-213ENST00000630925 PIM1P11309 404 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-213ENST00000630925 LYL1P12980 280 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 OXTRP30559 389 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 ADRA1AP35348 466 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 MC3RP41968 323 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 CCNG1P51959 295 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 NRG3P56975 720 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 RAB11AP62491 216 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 GNAI1P63096 354 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 GLO1Q04760 184 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 CSTF1Q05048 431 aaKnown RBP4.71□□□□□ -1.66
SDCBP-213ENST00000630925 PPP1R8Q12972 351 aaKnown RBP4.71□□□□□ -1.66
SDCBP-213ENST00000630925 PRKAA1Q13131 559 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 PMS2P3Q13401 168 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 PTPRCAPQ14761 206 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 RAB11BQ15907 218 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 PRAMEF7Q5VXH5 474 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 ZNF470Q6ECI4 717 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 NCAPH2Q6IBW4 605 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 C1orf94Q6P1W5 598 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 ZC3H14Q6PJT7 736 aaKnown RBP4.71□□□□□ -1.66
SDCBP-213ENST00000630925 C17orf99Q6UX52 265 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 FAM35AQ86V20 835 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 PLCZ1Q86YW0 608 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 ZNF595Q8IYB9 648 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 ARFGAP1Q8N6T3 406 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 MLKLQ8NB16 471 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 OR5T1Q8NG75 326 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 EXD1Q8NHP7 514 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 ABHD5Q8WTS1 349 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 SMG7Q92540 1137 aaKnown RBP4.71□□□□□ -1.66
SDCBP-213ENST00000630925 HAS2Q92819 552 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 REXO5Q96IC2 774 aaKnown RBP4.71□□□□□ -1.66
SDCBP-213ENST00000630925 PBKQ96KB5 322 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 PSMG3-AS1Q96PY0 264 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 MMS19Q96T76 1030 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 CHID1Q9BWS9 393 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 UBE2OQ9C0C9 1292 aaKnown RBP4.71□□□□□ -1.66
SDCBP-213ENST00000630925 NDEL1Q9GZM8 345 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 MMP27Q9H306 513 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 GAL3ST2Q9H3Q3 398 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 RIMS4Q9H426 269 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms