RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 FFAR3O14843 346 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 GPR42O15529 346 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 KDM1AO60341 852 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 PSIP1O75475 530 aaKnown RBP12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 VPS41P49754 854 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 TIAL1Q01085 375 aaKnown RBP eCLIP12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 GRM7Q14831 915 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 TMED2Q15363 201 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 KLHL38Q2WGJ6 581 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 VWA2Q5GFL6 755 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 ZC3H12BQ5HYM0 836 aaKnown RBP12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 PRAMEF13Q5VWM6 474 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 CYHR1Q6ZMK1 362 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 CILP2Q8IUL8 1156 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 DENND6AQ8IWF6 608 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 LRRC8AQ8IWT6 810 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 PARP9Q8IXQ6 854 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 PPFIBP2Q8ND30 876 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 SSC4DQ8WTU2 575 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 PKP4Q99569 1192 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 DPH7Q9BTV6 452 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 LRRC4CQ9HCJ2 640 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 ATP13A2Q9NQ11 1180 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 ZC3H7BQ9UGR2 993 aaKnown RBP12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 POLEQ07864 2286 aa12.91□□□□□ -0.34
SOX2-OT-241ENST00000626948 CENPEQ02224 2701 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 IGLV3-12A0A075B6K2 115 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 HYKKA2RU49 373 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 MYO1CO00159 1063 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 SRPX2O60687 465 aaPredicted RBP12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 KLHL18O94889 574 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 CLDN1O95832 211 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 CD63P08962 238 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 PKMP14618 531 aaKnown RBP12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 OGNP20774 298 aaKnown RBP12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 COL8A1P27658 744 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 ATP5DP30049 168 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 MAGEA3P43357 314 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 CDK16Q00536 496 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 KLC1Q07866 573 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 GPS1Q13098 491 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 AIMP2Q13155 320 aaKnown RBP12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 CTBP1Q13363 440 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 HKDC1Q2TB90 917 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 ANKRD20A4Q4UJ75 823 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 TCTE1Q5JU00 501 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 ZNF425Q6IV72 752 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 C4orf22Q6V702 233 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 GSTA5Q7RTV2 222 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 PAQR7Q86WK9 346 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 REXO1L1PQ8IX06 675 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 IQCKQ8N0W5 287 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 RASGEF1CQ8N431 466 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 OR9A1PQ8NGU1 263 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 PRR7Q8TB68 274 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 STT3BQ8TCJ2 826 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 SKA2Q8WVK7 121 aaPredicted RBP12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 PSMF1Q92530 271 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 C8orf44Q96CB5 159 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 RAB11FIP5Q9BXF6 653 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 INTS7Q9NVH2 962 aaKnown RBP12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 SPATA7Q9P0W8 599 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 CDC23Q9UJX2 597 aa12.9□□□□□ -0.34
SOX2-OT-241ENST00000626948 CROCCQ5TZA2 2017 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 A1L4Q6 167 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 H0YGG7 62 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 E2F3O00716 465 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 KPNA5O15131 536 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 P2RX6O15547 441 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 FOXS1O43638 330 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 FKBP9O95302 570 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 LDLRP01130 860 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 KRT14P02533 472 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 ESR1P03372 595 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 EIF2S1P05198 315 aaKnown RBP12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 CCDC175P0C221 793 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 ZGLP1P0C6A0 271 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 ITGA3P26006 1051 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 CCNFP41002 786 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 ARF3P61204 181 aaPredicted RBP12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 CUL1Q13616 776 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 YOD1Q5VVQ6 348 aaPredicted RBP12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 ATG9BQ674R7 924 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 MRNIPQ6NTE8 343 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 NEPROQ6NW34 567 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 PRSS58Q8IYP2 241 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 OTUD6BQ8N6M0 293 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 AMER3Q8N944 861 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 TRIM58Q8NG06 486 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 ZNF480Q8WV37 535 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 NACC2Q96BF6 587 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 SERPINB12Q96P63 405 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 OR2A5Q96R48 311 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 TCF12Q99081 682 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 ZFYVE21Q9BQ24 234 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 PLCD4Q9BRC7 762 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 ZNF304Q9HCX3 659 aa12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 FBXO6Q9NRD1 293 aaPredicted RBP12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 CUEDC1Q9NWM3 386 aaPredicted RBP12.89□□□□□ -0.35
SOX2-OT-241ENST00000626948 MAP10Q9P2G4 905 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms