RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 FUBP1Q96AE4 644 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 HHIPL1Q96JK4 782 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 TBATAQ96M53 351 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 OR2A14Q96R47 310 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 PPP1R16BQ96T49 567 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CPPED1Q9BRF8 314 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 MED10Q9BTT4 135 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 THUMPD3Q9BV44 507 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 GABARAPL3Q9BY60 117 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 C6orf62Q9GZU0 229 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 MKRN2Q9H000 416 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 IRF2BPLQ9H1B7 796 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 KCNH6Q9H252 994 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CXCL16Q9H2A7 254 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 TMEM245Q9H330 911 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 NXF3Q9H4D5 531 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 RIBC2Q9H4K1 309 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SYNDIG1Q9H7V2 258 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 RRAGCQ9HB90 399 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ZBTB20Q9HC78 741 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 IL1RAPQ9NPH3 570 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 RPRD1BQ9NQG5 326 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 OLA1Q9NTK5 396 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 EVA1BQ9NVM1 165 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 TAS2R9Q9NYW1 312 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 NUDT4Q9NZJ9 180 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 MARCH4Q9P2E8 410 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 GALPQ9UBC7 116 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 TBC1D24Q9ULP9 559 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CFL2Q9Y281 166 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 TNPO3Q9Y5L0 923 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SNX10Q9Y5X0 201 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 COMMD10Q9Y6G5 202 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 PCM1Q15154 2024 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 COL4A6Q14031 1691 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ZNF106Q9H2Y7 1883 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 A0A096LPI6 279 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 MEIOCA2RUB1 952 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CLCA1A8K7I4 914 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CLDN5O00501 218 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 IRAK2O43187 625 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ARHGEF9O43307 516 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ICMTO60725 284 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 MITFO75030 526 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 RHOBTB1O94844 696 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SERPINA1P01009 418 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SLC4A1P02730 911 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ALPPP05187 535 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 FGF1P05230 155 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ATXN1LP0C7T5 689 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 UBL4AP11441 157 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 AKR1A1P14550 325 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 HOXB9P17482 250 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CST5P28325 142 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 KRT20P35900 424 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 TGFBR1P36897 503 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 GNPDA1P46926 289 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CLCN4P51793 760 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 STC1P52823 247 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 LILRA4P59901 499 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ERVPABLB-1P60509 514 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 RPP38P78345 283 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 MRPS6P82932 125 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SREBF2Q12772 1141 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 TNK1Q13470 666 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 DGCR6Q14129 220 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 RBBP7Q16576 425 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CCL14Q16627 93 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SYT16Q17RD7 645 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 AP5B1Q2VPB7 878 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 FAM219BQ5XKK7 198 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 LRRC66Q68CR7 880 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 RGMBQ6NW40 437 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 METTL2BQ6P1Q9 378 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ERICH5Q6P6B1 374 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 PAQR3Q6TCH7 311 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CBLL1Q75N03 491 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SPATC1Q76KD6 591 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ZNF367Q7RTV3 350 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SAPCD2Q86UD0 394 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 TAC4Q86UU9 113 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SLC51BQ86UW2 128 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 PIM3Q86V86 326 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ZSWIM9Q86XI8 627 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CCDC28AQ8IWP9 274 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ENTHD1Q8IYW4 607 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ABI1Q8IZP0 508 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 UMODL1-AS1Q8N2C9 162 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 RYBPQ8N488 228 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 C1orf52Q8N6N3 182 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 TRPV1Q8NER1 839 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 OR10T2Q8NGX3 314 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ZFAND1Q8TCF1 268 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ZNF675Q8TD23 568 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SH3RF2Q8TEC5 729 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 GGHQ92820 318 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 DNASE1L2Q92874 299 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 NCLNQ969V3 563 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CLIP3Q96DZ5 547 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms