RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 MAP3K7O43318 606 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 PLIN3O60664 434 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 VPS26AO75436 327 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 KIAA0754O94854 1291 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 RECKO95980 971 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 PROCP04070 461 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 GSTA1P08263 222 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 FOLR1P15328 257 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 ZNF37AP17032 561 aaPredicted RBP12.23□□□□□ -0.45
PNKP-217ENST00000625216 ZNF28P17035 718 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 ITGB6P18564 788 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 CD9P21926 228 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 PDHA2P29803 388 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 PPP1CAP62136 330 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 CYP4F2P78329 520 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 TUBB3Q13509 450 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 BOP1Q14137 746 aaKnown RBP12.23□□□□□ -0.45
PNKP-217ENST00000625216 BORAQ6PGQ7 559 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 CD200R1Q8TD46 325 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 KCNJ9Q92806 393 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 NXNL1Q96CM4 212 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 GPR78Q96P69 363 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 TSSK1BQ9BXA7 367 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 FAM117AQ9C073 453 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 UNKQ9C0B0 810 aaKnown RBP12.23□□□□□ -0.45
PNKP-217ENST00000625216 SEMA4CQ9C0C4 833 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 IQCGQ9H095 443 aaKnown RBP12.23□□□□□ -0.45
PNKP-217ENST00000625216 ADNPQ9H2P0 1102 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 GPAMQ9HCL2 828 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 FGF21Q9NSA1 209 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 IGSF5Q9NSI5 407 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 GEMIN8Q9NWZ8 242 aaKnown RBP12.23□□□□□ -0.45
PNKP-217ENST00000625216 POLG2Q9UHN1 485 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 KCND3Q9UK17 655 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 TLK1Q9UKI8 766 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 POMT2Q9UKY4 750 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 BTRCQ9Y297 605 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 ACOT9Q9Y305 439 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 PCDHB3Q9Y5E6 796 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 COMMD10Q9Y6G5 202 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 SDK2Q58EX2 2172 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 PIEZO2Q9H5I5 2752 aa12.23□□□□□ -0.45
PNKP-217ENST00000625216 BAHCC1Q9P281 2608 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 SLC5A10A0PJK1 596 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 NKX2-8O15522 239 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 KDM1AO60341 852 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 MSL3P1P0C860 447 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 POLR2CP19387 275 aaPredicted RBP12.22□□□□□ -0.45
PNKP-217ENST00000625216 ACADLP28330 430 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 CCT5P48643 541 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 CLCN7P51798 805 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 KPNA2P52292 529 aaKnown RBP12.22□□□□□ -0.45
PNKP-217ENST00000625216 GNGT1P63211 74 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 PDAP1Q13442 181 aaKnown RBP12.22□□□□□ -0.45
PNKP-217ENST00000625216 CSHL1Q14406 222 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 PTRHD1Q6GMV3 140 aaKnown RBP12.22□□□□□ -0.45
PNKP-217ENST00000625216 PAQR3Q6TCH7 311 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 AMIGO1Q86WK6 493 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 TBC1D21Q8IYX1 336 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 SPATA6LQ8N4H0 392 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 GALNT6Q8NCL4 622 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 PHC3Q8NDX5 983 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 ARMC2Q8NEN0 867 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 OR52E1Q8NGJ3 308 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 ELMO1Q92556 727 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 CAPS2Q9BXY5 557 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 LATS2Q9NRM7 1088 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 TAS2R13Q9NYV9 303 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 IL17BQ9UHF5 180 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 DCDC2Q9UHG0 476 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 LNPEPQ9UIQ6 1025 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 TUBD1Q9UJT1 453 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 ASF1AQ9Y294 204 aa12.22□□□□□ -0.45
PNKP-217ENST00000625216 C2orf74A8MZ97 194 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 C21orf140B9A014 251 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 E5RI56 91 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 H3BMM5 538 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 SHOX2O60902 331 aaPredicted RBP12.21□□□□□ -0.45
PNKP-217ENST00000625216 KLHL2O95198 593 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 TSPAN12O95859 305 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 LTA4HP09960 611 aaKnown RBP12.21□□□□□ -0.45
PNKP-217ENST00000625216 SBK3P0C264 359 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 EBLN1P0CF75 366 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 CCDC166P0CW27 439 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 COL6A2P12110 1019 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 TCN2P20062 427 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 CDH3P22223 829 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 PRDX3P30048 256 aaKnown RBP12.21□□□□□ -0.45
PNKP-217ENST00000625216 DLSTP36957 453 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 CCR10P46092 362 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 PREPP48147 710 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 GLRBP48167 497 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 KCNAB1Q14722 419 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 SYTL3Q4VX76 610 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 TECRLQ5HYJ1 363 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 HHATQ5VTY9 493 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 LRRC8EQ6NSJ5 796 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 PWWP2BQ6NUJ5 590 aa12.21□□□□□ -0.45
PNKP-217ENST00000625216 TBC1D1Q86TI0 1168 aaPredicted RBP12.21□□□□□ -0.45
PNKP-217ENST00000625216 CPNE9Q8IYJ1 553 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms