RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SEPHS2Q99611 448 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 CENPKQ9BS16 269 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 CHID1Q9BWS9 393 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 CIDEBQ9UHD4 219 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 OAZ3Q9UMX2 235 aa19.11■□□□□ 0.65
PCDHB11-202ENST00000624887 ANKRD33BA6NCL7 494 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 C1QTNF3-AMACRE9PGA6 284 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 PDLIM1O00151 329 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 ACOX3O15254 700 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 IL12RB1P42701 662 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 GTDC1Q4AE62 458 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 ATG9BQ674R7 924 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 VITQ6UXI7 678 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 MSANTD1Q6ZTZ1 278 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 METTL2AQ96IZ6 378 aaKnown RBP19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 EGLN2Q96KS0 407 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 GDF15Q99988 308 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 YIPF3Q9GZM5 350 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 KAT8Q9H7Z6 458 aaKnown RBP19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 SLC6A13Q9NSD5 602 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 DZANK1Q9NVP4 752 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 ATXN10Q9UBB4 475 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 C17orf113A0A1B0GUU1 675 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 DLGAP1O14490 977 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 RASAL1O95294 804 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 LDLRP01130 860 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 HSD3B1P14060 373 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 HOXB9P17482 250 aaPredicted RBP19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 PRPS1L1P21108 318 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 HSD3B2P26439 372 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 GTF2H3Q13889 308 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 E2F2Q14209 437 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 MAP7Q14244 749 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 XKR5Q6UX68 686 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 ZNF547Q8IVP9 402 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 CPA6Q8N4T0 437 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 RNF145Q96MT1 663 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 MTERF1Q99551 399 aaKnown RBP19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 HDAC8Q9BY41 377 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 ANKRD60Q9BZ19 345 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 CDH23Q9H251 3354 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 BRF2Q9HAW0 419 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 GPRC5BQ9NZH0 403 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 THAP10Q9P2Z0 257 aaPredicted RBP19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 GPR34Q9UPC5 381 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 INVSQ9Y283 1065 aa19.1■□□□□ 0.65
PCDHB11-202ENST00000624887 RNF103-CHMP3A0A140T963 221 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 ELOVL7A1L3X0 281 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 PRMT3O60678 531 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 C7P10643 843 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 PTPN6P29350 595 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 PEX19P40855 299 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 P2RY2P41231 377 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 HNRNPFP52597 415 aaKnown RBP19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 PLOD1Q02809 727 aaPredicted RBP19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 FCHO2Q0JRZ9 810 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 MTAPQ13126 283 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 RUNX3Q13761 415 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 PGS1Q32NB8 556 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 SLC30A9Q6PML9 568 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 GPR149Q86SP6 731 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 GPR180Q86V85 440 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 TMEM132CQ8N3T6 1108 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 SPDYE1Q8NFV5 336 aaPredicted RBP19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 OR52E4Q8NGH9 312 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 CXorf40AQ8TE69 158 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 ZNF480Q8WV37 535 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 TFAP2CQ92754 450 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 RAB7BQ96AH8 199 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 CPPED1Q9BRF8 314 aaPredicted RBP19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 SLC28A3Q9HAS3 691 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 PRSS16Q9NQE7 514 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 PCDHGA11Q9Y5H2 935 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 KCNE2Q9Y6J6 123 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 V9GYQ6 96 aa19.09■□□□□ 0.65
PCDHB11-202ENST00000624887 RANBP2P49792 3224 aaKnown RBP19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 EME2A4GXA9 379 aaPredicted RBP19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 GSTA4O15217 222 aa19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 VEGFDO43915 354 aa19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 LRATO95237 230 aa19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 EPHX1P07099 455 aa19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 RAP2AP10114 183 aa19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 GJA4P35212 333 aa19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 DPY19L1Q2PZI1 675 aa19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 FAM98BQ52LJ0 330 aaKnown RBP19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 IYDQ6PHW0 289 aa19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 FIG4Q92562 907 aa19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 C11orf24Q96F05 449 aaPredicted RBP19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 TSC22D3Q99576 134 aa19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 EBPLQ9BY08 206 aa19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 SGK2Q9HBY8 427 aa19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 HCN2Q9UL51 889 aa19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 RUVBL1Q9Y265 456 aaKnown RBP19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 FADS3Q9Y5Q0 445 aa19.08■□□□□ 0.65
PCDHB11-202ENST00000624887 EPOPA6NHQ4 379 aa19.08■□□□□ 0.64
PCDHB11-202ENST00000624887 ZNF8P17098 575 aaPredicted RBP19.08■□□□□ 0.64
PCDHB11-202ENST00000624887 RBBP5Q15291 538 aaKnown RBP19.08■□□□□ 0.64
PCDHB11-202ENST00000624887 CALHM3Q86XJ0 350 aa19.08■□□□□ 0.64
PCDHB11-202ENST00000624887 SYT12Q8IV01 421 aa19.08■□□□□ 0.64
PCDHB11-202ENST00000624887 CDCA3Q99618 268 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms