RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 EFHBQ8N7U6 833 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 SIDT2Q8NBJ9 832 aaKnown RBP14.78□□□□□ -0.04
PMS1-221ENST00000624204 ZMIZ2Q8NF64 920 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 PMEPA1Q969W9 287 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 PCED1BQ96HM7 432 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 ZFP42Q96MM3 310 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 THUMPD1Q9NXG2 353 aaKnown RBP14.78□□□□□ -0.04
PMS1-221ENST00000624204 SPASTQ9UBP0 616 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 PIN4Q9Y237 131 aaKnown RBP14.78□□□□□ -0.04
PMS1-221ENST00000624204 LCHNA4D1U4 455 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 UGT2B17O75795 530 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 GDF5P43026 501 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 ATN1P54259 1190 aaPredicted RBP14.78□□□□□ -0.04
PMS1-221ENST00000624204 TWF2Q6IBS0 349 aaKnown RBP14.78□□□□□ -0.04
PMS1-221ENST00000624204 SP110Q9HB58 689 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 CRTAC1Q9NQ79 661 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 SNTG1Q9NSN8 517 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 MROH6A6NGR9 719 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 E2F3O00716 465 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 FABP3P05413 133 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 MRPL19P49406 292 aaKnown RBP14.78□□□□□ -0.04
PMS1-221ENST00000624204 HK3P52790 923 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 IHHQ14623 411 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 INO80DQ53TQ3 878 aaPredicted RBP14.78□□□□□ -0.04
PMS1-221ENST00000624204 FAM205BPQ63HN1 556 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 GLRX5Q86SX6 157 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 FLCNQ8NFG4 579 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 LINGO1Q96FE5 620 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 FRMD6Q96NE9 622 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 ARNT2Q9HBZ2 717 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 FAM8A1Q9UBU6 413 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 PSORS1C1Q9UIG5 152 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 SNX7Q9UNH6 387 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 DERAQ9Y315 318 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 PCDHGA6Q9Y5G7 932 aa14.78□□□□□ -0.04
PMS1-221ENST00000624204 NIPSNAP2O75323 286 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 OR2B3O76000 313 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 CDK1P06493 297 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 HOXA11P31270 313 aaPredicted RBP14.77□□□□□ -0.04
PMS1-221ENST00000624204 NRIP1P48552 1158 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 CDKN1CP49918 316 aaPredicted RBP14.77□□□□□ -0.04
PMS1-221ENST00000624204 RENBPP51606 427 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 STC1P52823 247 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 SCN1BQ07699 218 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 FAM131AQ6UXB0 335 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 GLCCI1Q86VQ1 547 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 LRRC20Q8TCA0 184 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 EEF1AKMT1Q8WVE0 214 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 IMP4Q96G21 291 aaKnown RBP14.77□□□□□ -0.04
PMS1-221ENST00000624204 OR5M11Q96RB7 305 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 SLC22A4Q9H015 551 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 TMPRSS11EQ9UL52 423 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 GABRQQ9UN88 632 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 SAMD4AQ9UPU9 718 aaKnown RBP14.77□□□□□ -0.04
PMS1-221ENST00000624204 ACTL7AQ9Y615 435 aa14.77□□□□□ -0.04
PMS1-221ENST00000624204 CLCA1A8K7I4 914 aa14.77□□□□□ -0.05
PMS1-221ENST00000624204 MYCP01106 439 aaPredicted RBP14.77□□□□□ -0.05
PMS1-221ENST00000624204 CYP2A6P11509 494 aaPredicted RBP14.77□□□□□ -0.05
PMS1-221ENST00000624204 ERP29P30040 261 aaKnown RBP14.77□□□□□ -0.05
PMS1-221ENST00000624204 SDHAF4Q5VUM1 108 aa14.77□□□□□ -0.05
PMS1-221ENST00000624204 ZNF605Q86T29 641 aa14.77□□□□□ -0.05
PMS1-221ENST00000624204 ZNF557Q8N988 423 aaPredicted RBP14.77□□□□□ -0.05
PMS1-221ENST00000624204 SCAMP5Q8TAC9 235 aa14.77□□□□□ -0.05
PMS1-221ENST00000624204 SETD6Q8TBK2 473 aa14.77□□□□□ -0.05
PMS1-221ENST00000624204 ENKURQ8TC29 256 aa14.77□□□□□ -0.05
PMS1-221ENST00000624204 PGAP3Q96FM1 320 aaPredicted RBP14.77□□□□□ -0.05
PMS1-221ENST00000624204 FARSBQ9NSD9 589 aaKnown RBP14.77□□□□□ -0.05
PMS1-221ENST00000624204 SNTNA6NMZ2 147 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 IFRD1O00458 451 aaPredicted RBP14.76□□□□□ -0.05
PMS1-221ENST00000624204 STX16O14662 325 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 MRPS14O60783 128 aaKnown RBP14.76□□□□□ -0.05
PMS1-221ENST00000624204 HOXC5Q00444 222 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 CXCL9Q07325 125 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 DOK6Q6PKX4 331 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 DNAJC22Q8N4W6 341 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 SIGLEC11Q96RL6 698 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 ZNF382Q96SR6 550 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 GDF15Q99988 308 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 INPP5KQ9BT40 448 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 IL1RAPQ9NPH3 570 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 SSC5DA1L4H1 1573 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 GFRA2O00451 464 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 MUSKO15146 869 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 LGALS2P05162 132 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 ATF4P18848 351 aaPredicted RBP14.76□□□□□ -0.05
PMS1-221ENST00000624204 TNFRSF1BP20333 461 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 MLLT3P42568 568 aaPredicted RBP14.76□□□□□ -0.05
PMS1-221ENST00000624204 MAPK12P53778 367 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 CYP4F8P98187 520 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 C10orf62Q5T681 223 aaPredicted RBP14.76□□□□□ -0.05
PMS1-221ENST00000624204 IDO2Q6ZQW0 420 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 GALNT7Q86SF2 657 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 NIM1KQ8IY84 436 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 ZFAND1Q8TCF1 268 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 COL21A1Q96P44 957 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 ZSCAN5AQ9BUG6 496 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 HDHD5Q9BXW7 423 aa14.76□□□□□ -0.05
PMS1-221ENST00000624204 OLA1Q9NTK5 396 aaKnown RBP14.76□□□□□ -0.05
PMS1-221ENST00000624204 TRMT6Q9UJA5 497 aaKnown RBP14.76□□□□□ -0.05
PMS1-221ENST00000624204 STX7O15400 261 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms