RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 OR4F3Q6IEY1 312 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 OR2T5Q6IEZ7 315 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 CAPN13Q6MZZ7 669 aaPredicted RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 DUS1LQ6P1R4 473 aaKnown RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 DOK6Q6PKX4 331 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 CBLL1Q75N03 491 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 EIF3MQ7L2H7 374 aaKnown RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 PIWIL3Q7Z3Z3 882 aaKnown RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 DDX53Q86TM3 631 aaKnown RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 CYP4Z1Q86W10 505 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 EGFL6Q8IUX8 553 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 BBS7Q8IWZ6 715 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 PARP8Q8N3A8 854 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 PIK3C3Q8NEB9 887 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 DDHD1Q8NEL9 900 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 OR2T29Q8NH02 315 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 RNF217Q8TC41 542 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 MCOLN3Q8TDD5 553 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 GIPC3Q8TF64 312 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 STARD8Q92502 1023 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 SGCDQ92629 289 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 MRPS31Q92665 395 aaKnown RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 ABTB1Q969K4 478 aaPredicted RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 ASIC4Q96FT7 647 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 SCLYQ96I15 445 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 COX4I2Q96KJ9 171 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 HIST1H2AHQ96KK5 128 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 TSSK3Q96PN8 268 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 FRG2BQ96QU4 278 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 HIST1H2AJQ99878 128 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 H2AFJQ9BTM1 129 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 BEGAINQ9BUH8 593 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 FUNDC2Q9BWH2 189 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 DUSP21Q9H596 190 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 IL1RAPQ9NPH3 570 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 AASDHPPTQ9NRN7 309 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 FAM120CQ9NX05 1096 aaKnown RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 CFAP97Q9P2B7 532 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 NFKBIL1Q9UBC1 381 aaPredicted RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 MAPRE3Q9UPY8 281 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 SH3BP1Q9Y3L3 701 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 HELZP42694 1942 aaKnown RBP9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 PLXNA2O75051 1894 aa9.34□□□□□ -0.91
IGHV3-54-201ENST00000622166 PABPN1LA6NDY0 278 aaKnown RBP9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 A8MX80 341 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 WASH3PC4AMC7 463 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 CLIC1O00299 241 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 FPGTO14772 594 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 MAGEB3O15480 346 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 GABARAPO95166 117 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 KCNK5O95279 499 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 FKBP9O95302 570 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 ZBTB11O95625 1053 aaPredicted RBP9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 URODP06132 367 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 UGT2B4P06133 528 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 ATP1B2P14415 290 aaPredicted RBP9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 ENGP17813 658 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 IGFBP5P24593 272 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 HTR1BP28222 390 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 DNAJA1P31689 397 aaKnown RBP9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 KDELR2P33947 212 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 CTSOP43234 321 aaPredicted RBP9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 KIR3DL1P43629 444 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 CLK3P49761 638 aaKnown RBP9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 DAPP51397 102 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 DCDC1P59894 354 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 PFN3P60673 137 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 CYP4F8P98187 520 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 KCNC4Q03721 635 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 CHIT1Q13231 466 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 AQP6Q13520 282 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 RAPSNQ13702 412 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 VEZF1Q14119 521 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 UGT8Q16880 541 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 CRTC3Q6UUV7 619 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 DCDC5Q6ZRR9 648 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 RFLNAQ6ZTI6 216 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 CYP2U1Q7Z449 544 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 PTOV1Q86YD1 416 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 TMC8Q8IU68 726 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 VRK3Q8IV63 474 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 SYNPOQ8N3V7 929 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 SLC15A4Q8N697 577 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 BPIFB6Q8NFQ5 453 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 OR8J2Q8NGG1 315 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 WDR20Q8TBZ3 569 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 CHPT1Q8WUD6 406 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 FAR1Q8WVX9 515 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 TIFAQ96CG3 184 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 ZNF689Q96CS4 500 aaPredicted RBP9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 YIPF6Q96EC8 236 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 TMEM169Q96HH4 297 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 APOLD1Q96LR9 279 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 PITX2Q99697 317 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 P2RY13Q9BPV8 354 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 EMILIN2Q9BXX0 1053 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 BRD9Q9H8M2 597 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 LTB4R2Q9NPC1 389 aa9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.33□□□□□ -0.92
IGHV3-54-201ENST00000622166 RAD18Q9NS91 495 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms