RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 EVPLLA8MZ36 301 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 CLIC1O00299 241 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 DUSP11O75319 330 aaKnown RBP15.33■□□□□ 0.04
NPHP4-211ENST00000622020 CLDN9O95484 217 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 FABP3P05413 133 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 SDC1P18827 310 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 ATF6P18850 670 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 TCEA1P23193 301 aaKnown RBP15.33■□□□□ 0.04
NPHP4-211ENST00000622020 RPIAP49247 311 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 GZMMP51124 257 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 ACOX1Q15067 660 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 STEAP3Q658P3 488 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 ATG9BQ674R7 924 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 SNX20Q7Z614 316 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 TMEM173Q86WV6 379 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-211ENST00000622020 ZBTB2Q8N680 514 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 REXO4Q9GZR2 422 aaKnown RBP15.33■□□□□ 0.04
NPHP4-211ENST00000622020 THUMPD1Q9NXG2 353 aaKnown RBP15.33■□□□□ 0.04
NPHP4-211ENST00000622020 TAS2R16Q9NYV7 291 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 ANKRD36A6QL64 1941 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 TRBV5-3A0A0A0MS03 114 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 SMAD6O43541 496 aaKnown RBP15.33■□□□□ 0.04
NPHP4-211ENST00000622020 DGKAP23743 735 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 CHRNA6Q15825 494 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 SYT6Q5T7P8 510 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-211ENST00000622020 RFLNAQ6ZTI6 216 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 TSPAN33Q86UF1 283 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 ARMC8Q8IUR7 673 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 GLB1L3Q8NCI6 653 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-211ENST00000622020 RHOXF1Q8NHV9 184 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 ITPKCQ96DU7 683 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 ZFYVE1Q9HBF4 777 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 IL1RAPQ9NPH3 570 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 THG1LQ9NWX6 298 aaKnown RBP15.33■□□□□ 0.04
NPHP4-211ENST00000622020 IL37Q9NZH6 218 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 MBD1Q9UIS9 605 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-211ENST00000622020 TESMINQ9Y4I5 508 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 OARD1Q9Y530 152 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 SNX8Q9Y5X2 465 aa15.33■□□□□ 0.04
NPHP4-211ENST00000622020 FAM220BPB1ANY3 271 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 FPGTO14772 594 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 SNPHO15079 494 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 COCHO43405 550 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 ERN1O75460 977 aaKnown RBP15.32■□□□□ 0.04
NPHP4-211ENST00000622020 WBP4O75554 376 aaKnown RBP15.32■□□□□ 0.04
NPHP4-211ENST00000622020 GRK5P34947 590 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 ZXDCQ2QGD7 858 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-211ENST00000622020 RFX4Q33E94 735 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 KDM4DQ6B0I6 523 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 MTERF1Q99551 399 aaKnown RBP15.32■□□□□ 0.04
NPHP4-211ENST00000622020 COPS4Q9BT78 406 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 RNF38Q9H0F5 515 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 KCNH6Q9H252 994 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 EHD1Q9H4M9 534 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 USP34Q70CQ2 3546 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 MTX2O75431 263 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 WDR47O94967 919 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 OR1E2P47887 323 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 NFATC2Q13469 925 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 ATAD3BQ5T9A4 648 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 ANKS3Q6ZW76 656 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 CCDC80Q76M96 950 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 CALHM3Q86XJ0 350 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 STK40Q8N2I9 435 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 UTP15Q8TED0 518 aaKnown RBP15.32■□□□□ 0.04
NPHP4-211ENST00000622020 STARD8Q92502 1023 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 CHCHD6Q9BRQ6 235 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 RMND5AQ9H871 391 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 REEP1Q9H902 201 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 FBXO8Q9NRD0 319 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 TMEM184CQ9NVA4 438 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 QPCTLQ9NXS2 382 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 SAMD4AQ9UPU9 718 aaKnown RBP15.32■□□□□ 0.04
NPHP4-211ENST00000622020 SLC22A14Q9Y267 594 aa15.32■□□□□ 0.04
NPHP4-211ENST00000622020 GBF1Q92538 1859 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 COL4A4P53420 1690 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-211ENST00000622020 SLC38A8A6NNN8 435 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 SSX4O60224 188 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 CLDN11O75508 207 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 KRT6AP02538 564 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 KRT6BP04259 564 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 HMGCLP35914 325 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 KRT6CP48668 564 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 RING1Q06587 406 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 KIAA1614Q5VZ46 1190 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 NCEH1Q6PIU2 408 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 LYSMD2Q8IV50 215 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 CCDC103Q8IW40 242 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 ENTHD1Q8IYW4 607 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 Q96MT0 163 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 OR51E2Q9H255 320 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 ANKMY1Q9P2S6 941 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 C2orf78A6NCI8 922 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 GAPDHSO14556 408 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-211ENST00000622020 CCNDBP1O95273 360 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 ALOX5P09917 674 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 ITGAMP11215 1152 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 EPORP19235 508 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 CTGFP29279 349 aa15.31■□□□□ 0.04
NPHP4-211ENST00000622020 PTPN6P29350 595 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms