RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 DNAJB9Q9UBS3 223 aa16.96■□□□□ 0.31
FAM3A-222ENST00000621967 NDRG2Q9UN36 371 aaKnown RBP16.96■□□□□ 0.31
FAM3A-222ENST00000621967 ZNF821O75541 412 aaPredicted RBP16.96■□□□□ 0.3
FAM3A-222ENST00000621967 SCELO95171 688 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 CBSLP0DN79 551 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 EPB42P16452 691 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 CBSP35520 551 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 SEC13P55735 322 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 PLIN5Q00G26 463 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 PLCL1Q15111 1095 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 TTLL9Q3SXZ7 439 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 ZNF773Q6PK81 442 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 ENPP6Q6UWR7 440 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 SIX5Q8N196 739 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 DNAJB8Q8NHS0 232 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 FIG4Q92562 907 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 AURKBQ96GD4 344 aaPredicted RBP16.96■□□□□ 0.3
FAM3A-222ENST00000621967 MRGPRX3Q96LB0 322 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 SH3GL1Q99961 368 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 C1orf109Q9NX04 203 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.96■□□□□ 0.3
FAM3A-222ENST00000621967 SLCO3A1Q9UIG8 710 aa16.96■□□□□ 0.3
FAM3A-222ENST00000621967 MRPS17Q9Y2R5 130 aaKnown RBP16.96■□□□□ 0.3
FAM3A-222ENST00000621967 HEMK1Q9Y5R4 338 aaPredicted RBP16.96■□□□□ 0.3
FAM3A-222ENST00000621967 ELOVL7A1L3X0 281 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 H3BMQ9 156 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 K7EQS6 105 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 PCNAP12004 261 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 JUNBP17275 347 aaPredicted RBP16.95■□□□□ 0.3
FAM3A-222ENST00000621967 GKP32189 559 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 SHMT2P34897 504 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 EGFLAMQ63HQ2 1017 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 C22orf39Q6P5X5 142 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 TTC23LQ6PF05 361 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 SERPINA13PQ6UXR4 307 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 STK32CQ86UX6 486 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 ZSWIM9Q86XI8 627 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 ZNF513Q8N8E2 541 aaPredicted RBP16.95■□□□□ 0.3
FAM3A-222ENST00000621967 PJA1Q8NG27 643 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 VOPP1Q96AW1 172 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 COG8Q96MW5 612 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 OSBPL6Q9BZF3 934 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 CEP44Q9C0F1 390 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 ATP13A3Q9H7F0 1226 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 KCTD5Q9NXV2 234 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 USE1Q9NZ43 259 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 ADGRE2Q9UHX3 823 aa16.95■□□□□ 0.3
FAM3A-222ENST00000621967 KRBA1A5PL33 1030 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 AREL1O15033 823 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 GSTA4O15217 222 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 SEC22BO75396 215 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 STK16O75716 305 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 RETP07949 1114 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 EPORP19235 508 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 GGT5P36269 586 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 ZNF234Q14588 700 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 IMPG1Q17R60 797 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 ZIK1Q3SY52 487 aaPredicted RBP16.94■□□□□ 0.3
FAM3A-222ENST00000621967 ATG9BQ674R7 924 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 ZDHHC13Q8IUH4 622 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 CHPFQ8IZ52 775 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 SVOPLQ8N434 492 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 KRTCAP2Q8N6L1 136 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 SLC47A1Q96FL8 570 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 THUMPD3Q9BV44 507 aaKnown RBP16.94■□□□□ 0.3
FAM3A-222ENST00000621967 ZDHHC4Q9NPG8 344 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 TMEM9Q9P0T7 183 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 ZNHIT2Q9UHR6 403 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 MAN2B2Q9Y2E5 1009 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 MAGED1Q9Y5V3 778 aaPredicted RBP16.94■□□□□ 0.3
FAM3A-222ENST00000621967 A0A0J9YVX5 310 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 FAM220BPB1ANY3 271 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 G3V2T6 193 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 EIF3FO00303 357 aaPredicted RBP16.94■□□□□ 0.3
FAM3A-222ENST00000621967 CXCR6O00574 342 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 BNIP3LO60238 219 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 ATE1O95260 518 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 IGSF6O95976 241 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 BCKDHAP12694 445 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 HOXB9P17482 250 aaPredicted RBP16.94■□□□□ 0.3
FAM3A-222ENST00000621967 ELK4P28324 431 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 TIE1P35590 1138 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 NSG1P42857 185 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 YAP1P46937 504 aaKnown RBP16.94■□□□□ 0.3
FAM3A-222ENST00000621967 VASPP50552 380 aaPredicted RBP16.94■□□□□ 0.3
FAM3A-222ENST00000621967 PPP2R2BQ00005 443 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 EPS8Q12929 822 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 FBXO43Q4G163 708 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 C2orf27AQ580R0 203 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 LRIF1Q5T3J3 769 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 MBOAT1Q6ZNC8 495 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 TSPAN33Q86UF1 283 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 CALHM3Q86XJ0 350 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 MICU2Q8IYU8 434 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 CLEC4FQ8N1N0 589 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 GPR26Q8NDV2 337 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 FBXO30Q8TB52 745 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 ULK4Q96C45 1275 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 PHF12Q96QT6 1004 aa16.94■□□□□ 0.3
FAM3A-222ENST00000621967 OSBPL10Q9BXB5 764 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms