RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 FBP2O00757 339 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ADAM10O14672 748 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 FFAR3O14843 346 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 GPR42O15529 346 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 ITGB1P05556 798 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 JUNDP17535 347 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 RPL10P27635 214 aaKnown RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 AKT2P31751 481 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SOX9P48436 509 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 XKP51811 444 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 VLDLRP98155 873 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 MXD1Q05195 221 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 HMGN3Q15651 99 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TMEM119Q4V9L6 283 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 C3P1Q6ZMU1 363 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 GK5Q6ZS86 529 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 C14orf80Q86SX3 495 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 TTLQ8NG68 377 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 LRTOMTQ8WZ04 291 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 DNASE1L2Q92874 299 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 FDXACB1Q9BRP7 624 aaPredicted RBP7.02□□□□□ -1.29
COLCA1-205ENST00000620864 PTPRHQ9HD43 1115 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 GPRC5CQ9NQ84 441 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 OR12D3Q9UGF7 316 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SNCAIPQ9Y6H5 919 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SLIT1O75093 1534 aa7.02□□□□□ -1.29
COLCA1-205ENST00000620864 SETBP1Q9Y6X0 1596 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 FIGNL2A6NMB9 653 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 CLDN4O14493 209 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 OIP5O43482 229 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 ADH1AP07327 375 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 HOXD8P13378 290 aaPredicted RBP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 HSD17B2P37059 387 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 MASP1P48740 699 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 PTP4A2Q12974 167 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 FGL2Q14314 439 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 PTPN20Q4JDL3 420 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 CERCAMQ5T4B2 595 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 SLC22A10Q63ZE4 541 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 HSDL2Q6YN16 418 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 FAM35AQ86V20 835 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 FAM71AQ8IYT1 594 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 AZIN2Q96A70 460 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 ZBED6CLQ96FA7 236 aaPredicted RBP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 JSRP1Q96MG2 331 aaPredicted RBP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 TWNKQ96RR1 684 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 COPS8Q99627 209 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 FEM1AQ9BSK4 669 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 FUNDC2Q9BWH2 189 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 EIF5A2Q9GZV4 153 aaKnown RBP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 POLR2J3Q9H1A7 115 aaKnown RBP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 WDR6Q9NNW5 1121 aaKnown RBP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 CFAP97Q9P2B7 532 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 TNFRSF10DQ9UBN6 386 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 PTPRJQ12913 1337 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 TTLL8A6PVC2 850 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF670-ZNF695F2Z2N8 137 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 STK16O75716 305 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 INMTO95050 263 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 TUBG1P23258 451 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 CD86P42081 329 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 HSPA14Q0VDF9 509 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 SMARCB1Q12824 385 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 ORC1Q13415 861 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 TIGD5Q53EQ6 642 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 SH3D19Q5HYK7 790 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 LGI2Q8N0V4 545 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 TMEM134Q9H6X4 195 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 SMURF1Q9HCE7 757 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 MKKSQ9NPJ1 570 aaPredicted RBP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 EIF2B3Q9NR50 452 aaKnown RBP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 PTTG3PQ9NZH4 202 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 BTRCQ9Y297 605 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 ANKRD33BA6NCL7 494 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 CTDNEP1O95476 244 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 TFPIP10646 304 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 ETFAP13804 333 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 VAMP1P23763 118 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 CRISP1P54107 249 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 FKBP1AP62942 108 aaKnown RBP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 SCGB2A2Q13296 93 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF169Q14929 603 aaPredicted RBP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 INTS6LQ5JSJ4 861 aaKnown RBP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 SLC27A1Q6PCB7 646 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 VSTM1Q6UX27 236 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 PRELID2Q8N945 189 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 GOT1L1Q8NHS2 421 aaPredicted RBP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 COQ8BQ96D53 544 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 AARSD1Q9BTE6 412 aaKnown RBP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 PREBQ9HCU5 417 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 FAM205CA6NFA0 338 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 J3QR89 54 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 TNFRSF10BO14763 440 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 ATXN7O15265 892 aaPredicted RBP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 CREBL2O60519 120 aaPredicted RBP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 FGF19O95750 216 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 CAPN3P20807 821 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 DDX6P26196 483 aaKnown RBP eCLIP7.01□□□□□ -1.29
COLCA1-205ENST00000620864 GPM6BQ13491 265 aa7.01□□□□□ -1.29
COLCA1-205ENST00000620864 SEZ6Q53EL9 994 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms