RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ATP6V0D1P61421 351 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 HMGCS1Q01581 520 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 PFKPQ01813 784 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 PRAMEF17Q5VTA0 474 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 SPPL2BQ8TCT7 592 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 CGREF1Q99674 301 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 TINAGL1Q9GZM7 467 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 C1orf21Q9H246 121 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 MMP27Q9H306 513 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 INTS7Q9NVH2 962 aaKnown RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 KAT6AQ92794 2004 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 A0A096LPI6 279 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 KANTRA0A1W2PQU2 76 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 TNFRSF1BP20333 461 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 C21orf33P30042 268 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 ACSL1P33121 698 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 GCNT1Q02742 428 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 TOMM20Q15388 145 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 Q6ZPB1 254 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 ANKS3Q6ZW76 656 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 USP51Q70EK9 711 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 CXXC5Q7LFL8 322 aaKnown RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 CHPFQ8IZ52 775 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 CNTNAP3BQ96NU0 1288 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 TSSK6Q9BXA6 273 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 OR51V1Q9H2C8 321 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 RHOJQ9H4E5 214 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 SLC28A3Q9HAS3 691 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 TMEM9Q9P0T7 183 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 TMEM181Q9P2C4 612 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 OR12D3Q9UGF7 316 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 RFPL3O75679 317 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 PTTG1O95997 202 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 KIAA1024LP59773 190 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 KLHL26Q53HC5 615 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 KIAA1614Q5VZ46 1190 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 ST7LQ8TDW4 575 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 NUDT8Q8WV74 236 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 SCRN2Q96FV2 425 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 FTHL17Q9BXU8 183 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF436Q9C0F3 470 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 BBOX1O75936 387 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 RPP14O95059 124 aaKnown RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 SRCP12931 536 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 CD6P30203 668 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 XKP51811 444 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 LRRC32Q14392 662 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 PGBD3Q8N328 593 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 OR5AK3PQ8NH89 298 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 RADILQ96JH8 1075 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 NEURL2Q9BR09 285 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 EVA1BQ9NVM1 165 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 ARL5AQ9Y689 179 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 J3QLW9 94 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 UBFD1O14562 309 aaKnown RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 CABYRO75952 493 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 SCGB1D2O95969 90 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 GLULP15104 373 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF19P17023 458 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 ADH7P40394 386 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 OGDHQ02218 1023 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 PLA2G7Q13093 441 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 RAB6CQ53S08 254 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 CATSPEREQ5SY80 951 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 GCNT6Q5T4J0 391 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 AGAP7PQ5VUJ5 663 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 PM20D1Q6GTS8 502 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 HJURPQ8NCD3 748 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF597Q96LX8 424 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 B3GNT4Q9C0J1 378 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 RAB6CQ9H0N0 254 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 SLC23A1Q9UHI7 598 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 NDRG2Q9UN36 371 aaKnown RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 DHX15O43143 795 aaKnown RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 ECI2O75521 394 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 PAHP00439 452 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 RPS2P15880 293 aaKnown RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 HSPA7P48741 367 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 MAP4K2Q12851 820 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 LY6KQ17RY6 165 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 XKR3Q5GH77 459 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 PACRGLQ8N7B6 248 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 CLEC4CQ8WTT0 213 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 MFSD14AQ96MC6 490 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 RGCCQ9H4X1 137 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 GBA2Q9HCG7 927 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 ENPP5Q9UJA9 477 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 LOC105369274A0A096LPK9 316 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 EMX1Q04741 257 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 GRK1Q15835 563 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 ADPRMQ3LIE5 342 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 OTUD1Q5VV17 481 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-214ENST00000620676 XYLT1Q86Y38 959 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 OR4N4Q8N0Y3 316 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 PAQR8Q8TEZ7 354 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 SLC38A4Q969I6 547 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 MASTLQ96GX5 879 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 RANBP9Q96S59 729 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 C20orf24Q9BUV8 137 aa4.92□□□□□ -1.62
VPS13D-214ENST00000620676 DNAJC5Q9H3Z4 198 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms