RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ENAMQ9NRM1 1142 aa16.42■□□□□ 0.22
HMGN3-203ENST00000620514 P4HTMQ9NXG6 502 aa16.42■□□□□ 0.22
HMGN3-203ENST00000620514 KLHL42Q9P2K6 505 aa16.42■□□□□ 0.22
HMGN3-203ENST00000620514 DHRS7Q9Y394 339 aa16.42■□□□□ 0.22
HMGN3-203ENST00000620514 ZNF451Q9Y4E5 1061 aa16.42■□□□□ 0.22
HMGN3-203ENST00000620514 SPENQ96T58 3664 aaKnown RBP16.41■□□□□ 0.22
HMGN3-203ENST00000620514 IGKV1-8A0A0C4DH67 115 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 HYKKA2RU49 373 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 SRPX2O60687 465 aaPredicted RBP16.41■□□□□ 0.22
HMGN3-203ENST00000620514 SLC16A8O95907 504 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 ONECUT2O95948 504 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 EIF2S1P05198 315 aaKnown RBP16.41■□□□□ 0.22
HMGN3-203ENST00000620514 CD63P08962 238 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 MPC1LP0DKB6 136 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 ERVK-10P10266 1014 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 TCP1P17987 556 aaKnown RBP16.41■□□□□ 0.22
HMGN3-203ENST00000620514 PGAM1P18669 254 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 IVDP26440 423 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 RPA3P35244 121 aaPredicted RBP16.41■□□□□ 0.22
HMGN3-203ENST00000620514 ARHGAP19Q14CB8 494 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 DCAF10Q5QP82 559 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 YOD1Q5VVQ6 348 aaPredicted RBP16.41■□□□□ 0.22
HMGN3-203ENST00000620514 SHISA6Q6ZSJ9 500 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 PIWIL4Q7Z3Z4 852 aaKnown RBP16.41■□□□□ 0.22
HMGN3-203ENST00000620514 PAQR7Q86WK9 346 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 IGDCC3Q8IVU1 814 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 LMNTD2Q8IXW0 634 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 ZNF480Q8WV37 535 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 ASB11Q8WXH4 323 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 INPP5DQ92835 1189 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 SLCO2A1Q92959 643 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 FKBP10Q96AY3 582 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 PWWP2AQ96N64 755 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 IP6K3Q96PC2 410 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 NDNQ99608 321 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 MFRPQ9BY79 579 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 MRPS30Q9NP92 439 aaKnown RBP16.41■□□□□ 0.22
HMGN3-203ENST00000620514 ABCF3Q9NUQ8 709 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 GPR83Q9NYM4 423 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 LUZP4Q9P127 313 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 CTSFQ9UBX1 484 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 ZC3H7BQ9UGR2 993 aaKnown RBP16.41■□□□□ 0.22
HMGN3-203ENST00000620514 TAC3Q9UHF0 121 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 PCYOX1Q9UHG3 505 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 MAU2Q9Y6X3 613 aa16.41■□□□□ 0.22
HMGN3-203ENST00000620514 TTLL8A6PVC2 850 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 H0YGG7 62 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 GFYI3L273 518 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 PEX12O00623 359 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 SYF2O95926 243 aaKnown RBP16.4■□□□□ 0.22
HMGN3-203ENST00000620514 GABRB3P28472 473 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 ARF3P61204 181 aaPredicted RBP16.4■□□□□ 0.22
HMGN3-203ENST00000620514 TIAL1Q01085 375 aaKnown RBP eCLIP16.4■□□□□ 0.22
HMGN3-203ENST00000620514 NKG7Q16617 165 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 FAM214AQ32MH5 1076 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 BBS9Q3SYG4 887 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 KLHL7Q8IXQ5 586 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 FBXO15Q8NCQ5 510 aaPredicted RBP16.4■□□□□ 0.22
HMGN3-203ENST00000620514 C2CD4AQ8NCU7 369 aaPredicted RBP16.4■□□□□ 0.22
HMGN3-203ENST00000620514 FER1L6-AS2Q96M78 137 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 SPSB2Q99619 263 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 EBNA1BP2Q99848 306 aaKnown RBP16.4■□□□□ 0.22
HMGN3-203ENST00000620514 ZFYVE21Q9BQ24 234 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 PLCD4Q9BRC7 762 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 SOX17Q9H6I2 414 aaPredicted RBP16.4■□□□□ 0.22
HMGN3-203ENST00000620514 PLAC1Q9HBJ0 212 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 SLC17A6Q9P2U8 582 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 PCDHGB7Q9Y5F8 929 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 ANKRD12Q6UB98 2062 aa16.4■□□□□ 0.22
HMGN3-203ENST00000620514 E7ENX8 843 aa16.39■□□□□ 0.21
HMGN3-203ENST00000620514 ALOX12BO75342 701 aa16.39■□□□□ 0.21
HMGN3-203ENST00000620514 VPS26AO75436 327 aa16.39■□□□□ 0.21
HMGN3-203ENST00000620514 ALBP02768 609 aa16.39■□□□□ 0.21
HMGN3-203ENST00000620514 PIM1P11309 404 aaPredicted RBP16.39■□□□□ 0.21
HMGN3-203ENST00000620514 ENO3P13929 434 aaPredicted RBP16.39■□□□□ 0.21
HMGN3-203ENST00000620514 GNG11P61952 73 aa16.39■□□□□ 0.21
HMGN3-203ENST00000620514 TAP2Q03519 686 aa16.39■□□□□ 0.21
HMGN3-203ENST00000620514 HP1BP3Q5SSJ5 553 aaPredicted RBP16.39■□□□□ 0.21
HMGN3-203ENST00000620514 ICE2Q659A1 982 aa16.39■□□□□ 0.21
HMGN3-203ENST00000620514 ZNF425Q6IV72 752 aa16.39■□□□□ 0.21
HMGN3-203ENST00000620514 CREG2Q8IUH2 290 aa16.39■□□□□ 0.21
HMGN3-203ENST00000620514 LRRC56Q8IYG6 542 aaPredicted RBP16.39■□□□□ 0.21
HMGN3-203ENST00000620514 RBMXL3Q8N7X1 1067 aaKnown RBP16.39■□□□□ 0.21
HMGN3-203ENST00000620514 C10orf90Q96M02 699 aa16.39■□□□□ 0.21
HMGN3-203ENST00000620514 SMAD5Q99717 465 aaKnown RBP16.39■□□□□ 0.21
HMGN3-203ENST00000620514 SLC26A1Q9H2B4 701 aa16.39■□□□□ 0.21
HMGN3-203ENST00000620514 WDR54Q9H977 334 aa16.39■□□□□ 0.21
HMGN3-203ENST00000620514 PYCARDQ9ULZ3 195 aa16.39■□□□□ 0.21
HMGN3-203ENST00000620514 G3BP2Q9UN86 482 aaKnown RBP16.39■□□□□ 0.21
HMGN3-203ENST00000620514 COMMD10Q9Y6G5 202 aa16.39■□□□□ 0.21
HMGN3-203ENST00000620514 PCM1Q15154 2024 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 ZNF839A8K0R7 811 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 SMAPO00193 183 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 DPM1O60762 260 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 SORBS2O94875 1100 aaKnown RBP16.38■□□□□ 0.21
HMGN3-203ENST00000620514 MMP11P24347 488 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 IMPA1P29218 277 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 HSD17B2P37059 387 aa16.38■□□□□ 0.21
HMGN3-203ENST00000620514 SKIV2L2P42285 1042 aaKnown RBP16.38■□□□□ 0.21
HMGN3-203ENST00000620514 CD97P48960 835 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms