RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 FMO3P31513 532 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 NUP62P37198 522 aaPredicted RBP10.11□□□□□ -0.79
VPS11-207ENST00000620429 MTHFRP42898 656 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 ALDH6A1Q02252 535 aaKnown RBP10.11□□□□□ -0.79
VPS11-207ENST00000620429 TUSC1Q2TAM9 212 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 SLC10A6Q3KNW5 377 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 UGT3A2Q3SY77 523 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 HSD17B12Q53GQ0 312 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 PDSS1Q5T2R2 415 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 RRM2BQ7LG56 351 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 PIWIL4Q7Z3Z4 852 aaKnown RBP10.11□□□□□ -0.79
VPS11-207ENST00000620429 KRT77Q7Z794 578 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 FUBP1Q96AE4 644 aaKnown RBP10.11□□□□□ -0.79
VPS11-207ENST00000620429 C19orf60Q96EN9 201 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 SIPA1Q96FS4 1042 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 LINC00052Q96N35 136 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 MRPL45Q9BRJ2 306 aaKnown RBP10.11□□□□□ -0.79
VPS11-207ENST00000620429 BCL2L14Q9BZR8 327 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 SRRQ9GZT4 340 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 TMEM245Q9H330 911 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 EXD2Q9NVH0 621 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 PCDHB14Q9Y5E9 798 aa10.11□□□□□ -0.79
VPS11-207ENST00000620429 DNAH12Q6ZR08 3092 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 A0A0J9YYE9 177 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 SLC12A8A0AV02 714 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 SLC35F4A4IF30 521 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 FAM170BA6NMN3 283 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 M0R082 166 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 AP2A1O95782 977 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 SNAI1O95863 264 aaPredicted RBP10.1□□□□□ -0.79
VPS11-207ENST00000620429 TGM6O95932 706 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 DARSP14868 501 aaKnown RBP10.1□□□□□ -0.79
VPS11-207ENST00000620429 ARF4P18085 180 aaPredicted RBP10.1□□□□□ -0.79
VPS11-207ENST00000620429 EFNA1P20827 205 aaPredicted RBP10.1□□□□□ -0.79
VPS11-207ENST00000620429 KCNK10P57789 538 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 RELQ04864 619 aaPredicted RBP10.1□□□□□ -0.79
VPS11-207ENST00000620429 LIPEQ05469 1076 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 RAPSNQ13702 412 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 CAPRIN1Q14444 709 aaKnown RBP10.1□□□□□ -0.79
VPS11-207ENST00000620429 ZNF79Q15937 498 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 TATDN3Q17R31 274 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 SYT16Q17RD7 645 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 TRIM60Q495X7 471 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 GPR158Q5T848 1215 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 CNSTQ6PJW8 725 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 TRILQ7L0X0 811 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 SLC26A9Q7LBE3 791 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 TSPYL5Q86VY4 417 aaPredicted RBP10.1□□□□□ -0.79
VPS11-207ENST00000620429 RNF135Q8IUD6 432 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 ZDHHC17Q8IUH5 632 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 SLC41A1Q8IVJ1 513 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 SPATA6LQ8N4H0 392 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 ZNF540Q8NDQ6 660 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 RNF139Q8WU17 664 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 BRI3BPQ8WY22 251 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 MYDGFQ969H8 173 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 MS4A4AQ96JQ5 239 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 GPR22Q99680 433 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 C11orf84Q9BUA3 381 aaPredicted RBP10.1□□□□□ -0.79
VPS11-207ENST00000620429 APOL5Q9BWW9 433 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 ASB7Q9H672 318 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 IL1RAPQ9NPH3 570 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 DNAJB9Q9UBS3 223 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 REV1Q9UBZ9 1251 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 ALG5Q9Y673 324 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 CCL15-CCL14A0A0B4J2E2 113 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 A0A1W2PP18 115 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 KRBOX1C9JBD0 128 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 DFFAO00273 331 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 HS6ST1O60243 411 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 NOBOXO60393 691 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 SLC35E2BP0CK96 405 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 HNRNPLP14866 589 aaKnown RBP eCLIP10.1□□□□□ -0.79
VPS11-207ENST00000620429 CAPN3P20807 821 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 KIR2DL3P43628 341 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 AKR1D1P51857 326 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 RRAS2P62070 204 aaPredicted RBP10.1□□□□□ -0.79
VPS11-207ENST00000620429 YBX1P67809 324 aaKnown RBP10.1□□□□□ -0.79
VPS11-207ENST00000620429 ZNF460Q14592 562 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 CCL15Q16663 113 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 LAIR1Q6GTX8 287 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 CCDC149Q6ZUS6 474 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 LARP4Q71RC2 724 aaKnown RBP eCLIP10.1□□□□□ -0.79
VPS11-207ENST00000620429 FAM181AQ8N9Y4 354 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 NLGN4YQ8NFZ3 816 aaPredicted RBP10.1□□□□□ -0.79
VPS11-207ENST00000620429 GTF3C2Q8WUA4 911 aaPredicted RBP10.1□□□□□ -0.79
VPS11-207ENST00000620429 TUBGCP3Q96CW5 907 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 SLC9A7Q96T83 725 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 C16orf70Q9BSU1 422 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 TTPALQ9BTX7 342 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 KATNBL1Q9H079 304 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 C11orf54Q9H0W9 315 aaPredicted RBP10.1□□□□□ -0.79
VPS11-207ENST00000620429 ELOVL6Q9H5J4 265 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 UBQLN2Q9UHD9 624 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 FZD10Q9ULW2 581 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 BAIAP2Q9UQB8 552 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 ERVW-1Q9UQF0 538 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 VPS9D1Q9Y2B5 631 aa10.1□□□□□ -0.79
VPS11-207ENST00000620429 OAS3Q9Y6K5 1087 aaKnown RBP10.1□□□□□ -0.79
VPS11-207ENST00000620429 NR5A2O00482 541 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms