RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 DYRK1BQ9Y463 629 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 TRAF6Q9Y4K3 522 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 PCDHB11Q9Y5F2 797 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 ENTPD2Q9Y5L3 495 aa7.75□□□□□ -1.17
CPNE3-209ENST00000620393 GPR179Q6PRD1 2367 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 A0A1B0GTL3 188 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 LNP1A1A4G5 178 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 OR6C74A6NCV1 312 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 LILRA5A6NI73 299 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 RHPN2P1A8MT19 583 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 ISM1B1AKI9 464 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 SLCO1B7G3V0H7 640 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 CDX4O14627 284 aaPredicted RBP7.74□□□□□ -1.17
CPNE3-209ENST00000620393 GIPC1O14908 333 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 CLGNO14967 610 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 AZIN1O14977 448 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 B4GAT1O43505 415 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 SIGLEC6O43699 453 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 UGDHO60701 494 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 LRP3O75074 770 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 OR4F21O95013 312 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 FKBP9O95302 570 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 CLDN9O95484 217 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 C1GALT1C1LP0DN25 315 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 UROSP10746 265 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 PNLIPP16233 465 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 AMD1P17707 334 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 POLR2CP19387 275 aaPredicted RBP7.74□□□□□ -1.17
CPNE3-209ENST00000620393 MPSTP25325 297 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 GPR3P46089 330 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 ABATP80404 500 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 IRF8Q02556 426 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 TRAF3Q13114 568 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 CHIT1Q13231 466 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 DOC2AQ14183 400 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 E2F2Q14209 437 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 KIR2DS3Q14952 304 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 SF3A2Q15428 464 aaKnown RBP7.74□□□□□ -1.17
CPNE3-209ENST00000620393 NR0B2Q15466 257 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 SF1Q15637 639 aaKnown RBP7.74□□□□□ -1.17
CPNE3-209ENST00000620393 CSRP2Q16527 193 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 UGT3A2Q3SY77 523 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 SH2D4BQ5SQS7 431 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 PRAMEF13Q5VWM6 474 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 LIPJQ5W064 366 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 ATG9BQ674R7 924 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 LETMD1Q6P1Q0 360 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 KLHL35Q6PF15 583 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 ZNF438Q7Z4V0 828 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 CPLX4Q7Z7G2 160 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 ZNF761Q86XN6 746 aaPredicted RBP7.74□□□□□ -1.17
CPNE3-209ENST00000620393 WDR75Q8IWA0 830 aaKnown RBP7.74□□□□□ -1.17
CPNE3-209ENST00000620393 CHCHD4Q8N4Q1 142 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 EID2Q8N6I1 236 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 ABHD11Q8NFV4 315 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 OR4F6Q8NGB9 312 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 OR4K1Q8NGD4 311 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 SLC5A11Q8WWX8 675 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 NEIL2Q969S2 332 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 WDR34Q96EX3 536 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 FAR2Q96K12 515 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 APOLD1Q96LR9 279 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 MAGEB10Q96LZ2 347 aaPredicted RBP7.74□□□□□ -1.17
CPNE3-209ENST00000620393 CCT8L2Q96SF2 557 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 ACAT2Q9BWD1 397 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 TBC1D10AQ9BXI6 508 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 EHD1Q9H4M9 534 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 ACTR8Q9H981 624 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 TNFRSF12AQ9NP84 129 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 ABCF3Q9NUQ8 709 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 SPHK1Q9NYA1 384 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 ACTR10Q9NZ32 417 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 VTI1BQ9UEU0 232 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 TAC3Q9UHF0 121 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 RNF11Q9Y3C5 154 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 RNF215Q9Y6U7 377 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 CACNA1HO95180 2353 aa7.74□□□□□ -1.17
CPNE3-209ENST00000620393 KCNE1BA0A087WTH5 132 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 LY6G6EA0A0G2JKS1 128 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 PIPSLA2A3N6 862 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 EME2A4GXA9 379 aaPredicted RBP7.73□□□□□ -1.17
CPNE3-209ENST00000620393 OR5K3A6NET4 321 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 C2orf74A8MZ97 194 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 E7EQ34 232 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 H7BY64 318 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 MATN2O00339 956 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 ZNF195O14628 629 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 HDAC3O15379 428 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 ZW10O43264 779 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 GFRA3O60609 400 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 CRCPO75575 148 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 UBXN7O94888 489 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 CCNDBP1O95273 360 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 FAM107AO95990 144 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 ENO1P06733 434 aaKnown RBP7.73□□□□□ -1.17
CPNE3-209ENST00000620393 PROS1P07225 676 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 CAPN1P07384 714 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 TROVE2P10155 538 aaKnown RBP eCLIP7.73□□□□□ -1.17
CPNE3-209ENST00000620393 KITP10721 976 aa7.73□□□□□ -1.17
CPNE3-209ENST00000620393 MYF5P13349 255 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms