RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 TWNKQ96RR1 684 aa11.96□□□□□ -0.49
MATR3-227ENST00000618441 MEAF6Q9HAF1 191 aa11.96□□□□□ -0.49
MATR3-227ENST00000618441 OLA1Q9NTK5 396 aaKnown RBP11.96□□□□□ -0.49
MATR3-227ENST00000618441 STAP1Q9ULZ2 295 aa11.96□□□□□ -0.49
MATR3-227ENST00000618441 SLX4Q8IY92 1834 aa11.96□□□□□ -0.49
MATR3-227ENST00000618441 TCRBV5S2A0A599 114 aa11.96□□□□□ -0.5
MATR3-227ENST00000618441 TO15178 435 aa11.96□□□□□ -0.5
MATR3-227ENST00000618441 PMM2O15305 246 aa11.96□□□□□ -0.5
MATR3-227ENST00000618441 MAPTP10636 758 aaKnown RBP11.96□□□□□ -0.5
MATR3-227ENST00000618441 PIK3CBP42338 1070 aa11.96□□□□□ -0.5
MATR3-227ENST00000618441 MAN2A2P49641 1150 aa11.96□□□□□ -0.5
MATR3-227ENST00000618441 SWI5Q1ZZU3 235 aa11.96□□□□□ -0.5
MATR3-227ENST00000618441 ESRP1Q6NXG1 681 aaKnown RBP11.96□□□□□ -0.5
MATR3-227ENST00000618441 TSGA13Q96PP4 275 aa11.96□□□□□ -0.5
MATR3-227ENST00000618441 CGRRF1Q99675 332 aa11.96□□□□□ -0.5
MATR3-227ENST00000618441 PIP5K1AQ99755 562 aa11.96□□□□□ -0.5
MATR3-227ENST00000618441 CARS2Q9HA77 564 aaKnown RBP11.96□□□□□ -0.5
MATR3-227ENST00000618441 ANKHQ9HCJ1 492 aa11.96□□□□□ -0.5
MATR3-227ENST00000618441 CCNB1IP1Q9NPC3 277 aa11.96□□□□□ -0.5
MATR3-227ENST00000618441 ADAM30Q9UKF2 790 aa11.96□□□□□ -0.5
MATR3-227ENST00000618441 SARDHQ9UL12 918 aa11.96□□□□□ -0.5
MATR3-227ENST00000618441 SAMHD1Q9Y3Z3 626 aaKnown RBP11.96□□□□□ -0.5
MATR3-227ENST00000618441 PCDHGB2Q9Y5G2 931 aa11.96□□□□□ -0.5
MATR3-227ENST00000618441 NINQ8N4C6 2090 aa11.96□□□□□ -0.5
MATR3-227ENST00000618441 SUPT3HB4E1H0 165 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 IFNA7P01567 189 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 C1QBP02746 253 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 HNMTP50135 292 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 STAT5BP51692 787 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 PSMD5Q16401 504 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 TUSC1Q2TAM9 212 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 KIAA1841Q6NSI8 718 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 LINC00299Q6ZSB3 139 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 SLC16A10Q8TF71 515 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 FAM167AQ96KS9 214 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 RPRD1AQ96P16 312 aaPredicted RBP11.95□□□□□ -0.5
MATR3-227ENST00000618441 LRRC3Q9BY71 257 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 TRIM54Q9BYV2 358 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 LRRC4Q9HBW1 653 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 UBQLN2Q9UHD9 624 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 AGO1Q9UL18 857 aaKnown RBP11.95□□□□□ -0.5
MATR3-227ENST00000618441 ISM1B1AKI9 464 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 RAC2P15153 192 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 PSMA3P25788 255 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 CLCN4P51793 760 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 PTPN11Q06124 597 aaPredicted RBP11.95□□□□□ -0.5
MATR3-227ENST00000618441 IL18Q14116 193 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 LCN1P1Q5VSP4 162 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 KDELC1Q6UW63 502 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 PRSS48Q7RTY5 328 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 SRFBP1Q8NEF9 429 aaKnown RBP11.95□□□□□ -0.5
MATR3-227ENST00000618441 HYLS1Q96M11 299 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 QRFPRQ96P65 431 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 CSPG4P5Q96PW8 444 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 CCDC32Q9BV29 185 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 SP110Q9HB58 689 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 NKIRAS2Q9NYR9 191 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 HCN3Q9P1Z3 774 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 PCDHA9Q9Y5H5 950 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 DNAJC15Q9Y5T4 150 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 TCRBV5S1A1TA0A578 114 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 INMT-MINDY4F8WBC2 141 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 PRSS23O95084 383 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 MAGEA3P43357 314 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 MAP2K3P46734 347 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 ELP6Q0PNE2 266 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 EXOSC2Q13868 293 aaKnown RBP11.95□□□□□ -0.5
MATR3-227ENST00000618441 USP39Q53GS9 565 aaKnown RBP11.95□□□□□ -0.5
MATR3-227ENST00000618441 CDKL4Q5MAI5 379 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 CLEC14AQ86T13 490 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 OR5K1Q8NHB7 308 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 DCAF4Q8WV16 495 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 DNASE1L2Q92874 299 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 DCLRE1CQ96SD1 692 aaKnown RBP11.95□□□□□ -0.5
MATR3-227ENST00000618441 CUEDC1Q9NWM3 386 aaPredicted RBP11.95□□□□□ -0.5
MATR3-227ENST00000618441 PDE4DIPQ5VU43 2346 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 NUP214P35658 2090 aaPredicted RBP11.95□□□□□ -0.5
MATR3-227ENST00000618441 OR2A25A4D2G3 310 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 UBFD1O14562 309 aaKnown RBP11.95□□□□□ -0.5
MATR3-227ENST00000618441 CDK1P06493 297 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 SYPP08247 313 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 CKMT1AP12532 417 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 AAK1Q2M2I8 961 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 PIK3R6Q5UE93 754 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 TRNP1Q6NT89 227 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 LRFN4Q6PJG9 635 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 TEX261Q6UWH6 196 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 ZNF782Q6ZMW2 699 aaPredicted RBP11.95□□□□□ -0.5
MATR3-227ENST00000618441 LARP4Q71RC2 724 aaKnown RBP eCLIP11.95□□□□□ -0.5
MATR3-227ENST00000618441 KANSL1Q7Z3B3 1105 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 DNAJC5GQ8N7S2 189 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 C2CD4CQ8TF44 421 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 RNF139Q8WU17 664 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 FAM151AQ8WW52 585 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 NDRG1Q92597 394 aaKnown RBP11.95□□□□□ -0.5
MATR3-227ENST00000618441 TPD52L3Q96J77 140 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 TTYH1Q9H313 450 aaPredicted RBP11.95□□□□□ -0.5
MATR3-227ENST00000618441 ZFP57Q9NU63 452 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 SLC2A6Q9UGQ3 507 aa11.95□□□□□ -0.5
MATR3-227ENST00000618441 LRFN2Q9ULH4 789 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms